Biomicroscopy II
MICRO-562
Biomicroscopy II
The course builds on Biomicroscopy I and combines theory of different microscopy techniques with hands-on experiments on the state-of-the-art microscopes at EPFL BioImaging and Optics Facility (BIOP). The goal of the course is to teach how to use commonly used optical microscopy techniques including brightfield, dark-field, phase-contrast, DIC, fluorescence as well as introduce advanced fluorescence microscopy techniques such as confocal, super-resolution and multi-photon.
Lectures:
Where: BC 01
When: Thursdays starting from 20 February at 13:15 (Prof. Hatice Altug)
Exercises:
Where: BC 01
When: Thursdays after lectures
Practical:
Where: BioImaging and
Optics Platform (BIOP)
When: Thursdays from middle of the semester: starting at 13:15 until 17:00 (Dr. Arne Seitz)
Online tutorials20 February 2025
Lecture Part:
- Review of Wide Field Microscopy (Biomicroscopy I)
- Dark-Field Microscopy
- Phase-Contrast Microscopy
27 February 2025
Lecture Part:
- Phase Contrast Microscopy
- Polarization Optics
- Polarization Microscopy
- Birefringence Optics
- Exercise02 (File)
- Exercise02 Solutions (File)
- 2025_Lecture_2 (File)
- Optional_Reading_Materials (Folder)
06 March 2025
Lecture Part:
Differential Interference Contrast (DIC) Microscopy
Fluorescence Microscopy Techniques:
- FRET (Förster resonance energy transfer) technique
- TIRF (Total internal reflection fluorescence) technique
- FRAP (Fluorescence recovery after photo bleaching) technique
- Exercise03 (File)
- Exercise03 Solutions (File)
- 2025_Lecture_3 (File)
- 2025_Optional_Reading_Material (File)
13 March 2025
Lecture Part:
- FRAP
- Confocal Microscopy
- Exercise04 (File)
- Exercise 4 Solution (File)
- Optional_Reading_Material_Confocal (File)
- 2025_Lecture_4 (File)
20 March 2025
Lecture Part:
- Advanced Microscopy I
27 March 2025
Lecture Part:
- Advanced Microscopy II
03 April 2025
Practical Part:
Introduction to Wide-Field Microscopy
10 April 2025
Practical Part:
Transmission Microscopy Techniques -1
17 April 2025
Fluorescence Microscopy - 1
24 April 2025
01 May 2025
Practical Part:
Fluorescence Microscopy - 2
08 May 2025
Practical Part:
Confocal microscopy
15 May 2025
Practical Part:
Confocal/Fluorescence Microscopy - Continued
22 May 2025
29 May 2025
HOLIDAY