Principles and applications of systems biology
ChE-411
This file is part of the content downloaded from Principles and applications of systems biology.
- Systems Biology: A brief overview (File)
- Can a biologist fix a radio? (File)
- From molecular to modular cell biology (File)
- Syllabus and Lecture 1 (File)
- Exercise: Software Setup (Text and media area)
- Software Installation Tutorial (File)
- CPLEX Installation - IMPORTANT (Page)
- Matlab - CPLEX - OS Compatibility matrices (Folder)
- MATLAB for Students (URL)
- GIT Download (URL)
- Link CPLEX WeTransfer (Expires 2nd October) (File)
- Exercise 1 (Text and media area)
- Exercise (File)
- E. coli GEM (File)
- Yeast.mat (File)
- Ex. 1 - Python (Folder)
- Short introduction to MATLAB (File)
- Cobra Tutorial MATLAB (recommended) (File)
- Lecture 2 (File)
- Michaelis Menten 1913 (translated) (File)
- Objective_functions (File)
- Exercise 2 (Text and media area)
- Exercise2 (File)
- Ex. 2 Python (File)
- Reduced E. coli GEM (File)
- Metabolomics data (File)
- Thermodynamics data (File)
- matTFA cheat sheet (new) (File)
- pyTFA cheat sheet (File)
- pyTFA and matTFA Pierre Salvy et al. (Supplementary) (File)
- A simple matlab example on how to use TFA (File)
- Quick dusting how to MATLAB ODEs (File)
- Solutions Ex. 1 (Text and media area)
- Solution Exercise 1 (File)
- Ex. 1 Solutions Python (File)
- Lecture 3 (File)
- Group_projects (File)
- Solutions Ex. 2 (Text and media area)
- Solution Exercise 2 (File)
- Solutions Ex. 2 Python (File)
- Project presentation guidelines (File)
- Early Feedback (Feedback)
- How To ODE - MATLAB (File)
- Recap: Numerical ODE Solving (File)
Presenting groups:
4 December
| 11:15 – 12:00 | 12:15 – 13:00 | 13:15 – 14:00 |
| 18 |
15 | 8 |
| 2 |
11 |
4 |
| 5 |
6 |
14 |
Presenting groups:
11 December
| 11:15 – 12:15 | 12:15 – 13:00 | 13:15 – 14:00 |
| 10 | 7 | 12 |
| 17 | 1 | 9 |
| 19 | 13 | 16 |
| 3 |