New tools & research strategies in personalized health
BIO-491
Media
About this course
Summary
This course introduces the concept of personalized health, exploring its foundational technologies as well as the technological, legal, and ethical challenges the field currently faces. Strategies and approaches used to address these challenges will also be discussed.Content
This course adopts a multidisciplinary approach to explore key aspects of personalized health. Following six to seven weeks of ex cathedra lectures delivered by renowned experts covering a broad range of topics, students will form groups of four-five. Under the guidance of a PI and TAs acting as a coaches, each group will investigate a specific problem, analyze its underlying factors, and propose potential solutions. The course will culminate in an oral defense of the project.
Learning Outcomes
By the end of the course, the student will be able to:
- Identify and explain the core principles of personalized health
- Discuss new technologies within the context of personalized health
Transversal skills
- Write clear and structured scientific or technical reports
- Deliver effective oral presentations
- Apply appropriate work methodologies and collaborate effectively within a team
- Receive and respond to feedback in a constructive manner
- Monitor progress against a defined plan and adjust it as needed
- Collect, organize, and interpret relevant data
- Persevere through challenges or initial setbacks to identify optimal solutions
- Use both general-purpose and domain-specific IT tools and resources
Teaching methods
A combination of ex-cathedra lectures, discussions, personalized coaching, group project work, and an oral defense of the final project.
Expected student activities
- Attend all lectures
- Actively participate in class discussions
- Collaborate effectively within a small group
- Contribute to the preparation and development of a group project
- Present and defend the project in an oral examination
Assessment methods
Written Component:
An individual mid-term assessment in the form of a multiple-choice
questionnaire (MCQ), based on lecture content.
Oral
Component:
Group presentation of the project, evaluated on the following criteria:
- Quality and clarity of the slides
- Clarity and depth of the oral presentation
- Ability to respond to questions
- Evidence of balanced contribution among group members in the preparation and delivery of the presentation
Project
Component:
Assessed based on:
- Relevance to the field of personalized health
- Clear explanation of the scientific and/or clinical background
- Coherent research strategy
- Ability to use feedback from the teaching team
- Integration of a multidisciplinary perspective
Supervision
Office hours -> No
Assistants -> Yes
Other -> Coach and contact persons for project
Resources
Bibliography: No prerequisite
Notes/Handbook: When possible,
copies of the slides will be provided
Marc Friedli & Jacques Fellay
February 19
15.15-16.00
Marc Friedli, Scientist, Unit of Precision Medicine, EPFL
New tools and research technologies in personalized health: Introduction
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16.15-17.00
Gaia Barazzetti, Research Ethics Compliance Officer, Research Office, EPFL
Ethical and social issues in personalized health 1/2
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17.15-18.00
Nathalie Brandenberg, Scientist, van der Goot lab, EPFL; Co-Founder, SUN bioscience SA and Doppl SA
The Role of Organoids in Precision Health
February 26
15.15-17.00
Olivier Michielin, Head of the Oncology Department at the Geneva University Hospitals (HUG)
TBD
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17.15-19.00
Mina Bjelogrlic, Head of Machine Learning, Human-Machine Interfaces in clinical settings Group, UNIGE
Leveraging Electronic Health Records, Medical Knowledge, and Information Technologies for Medical Discoveries
March 5
15.15-16.00
Raphael Gottardo, Director, Translational Biomedical Data Science Group @ CHUV & Full Professor in the Faculty of Biology and Medicine @ UNIL
Leveraging Single-Cell and Spatial Data for Personalized Health: A Computational Perspective
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16.15-18.00
Caroline Samer, Pharmacogenomics and Personalised Therapy Unit, HUG & UNIGE
Pharmacogenomics & personalized therapies: the right drug at the right dose for the right patient
March 12
Camille Goemans, Lab of Drug-microbiota Interactions, EPFL
Antibiotics and antibiotic resistance
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16.15-17.00
Gaia Barazzetti, Research Ethics Compliance Officer, Research Office, EPFL
Ethical and social issues in personalized health 2/2
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17.15-19.00
Julien Riou, Department of Epidemiology and Health Systems, Unisanté & UNIL
Precision public health
March 19
Joël Wagner, Department of Actuarial Science, Faculty of Business and Economics (HEC Lausanne)
Economical and governance aspects of personalized health
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17.15-19.00
Ioannis Xenarios, CHUV-UNIL, Health 2030 Genome Center
High throughput Computational Bioinformatics : AI-enabled and traditional approach to speed-up analysis
March 26
Flavia Hodel, Data scientist, Precision Medicine Unit, CHUV
Genomic Medicine
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16.15-17.00
Marcel Salathé, Epidemiology Lab, EPFL
Digital Epidemiology
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17.15-19.00
Katrin Männik, Head of Genomics Strategy, Health 2030 Genome Center, Geneva
Opportunities and challenges of implementing genomic medicine
April 2
Camille Goemans, Lab of Drug-microbiota Interactions, EPFL
The gut microbiome and human health
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16.15-17.00
Marc Friedli, Scientist, Unit of Precision Medicine, EPFL
Projects
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17.15-19.00
Friedhelm Hummel, Institute Neuro-X and Defitech Chair of Clinical Neuroengineering, EPFL
Towards personalized treatment strategies in neurological disorders
April 9
April 16
!!! Midterm written exam !!!
April 23
No class scheduled—group work can be completed at your convenience.
April 30
Group Work 2/3
No class scheduled—group work can be completed at your convenience.
May 7
Group Work 3/3
No class scheduled—group work can be completed at your convenience.
May 14
May 21
Exam: Group presentations 1/2
May 28
15.00-19.00
Exam: Group presentations 2/2