Scientific literature analysis in computational molecular biology

General Information

• News forum (Forum)
• Group choice (Group choice)
• Group finding (Forum)
• Google Docs to cheat sheet for protein design projects (URL)

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• Slides of intro lecture (File)

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• Accurate structure prediction of biomolecular interactions with AlphaFold 3 (File)

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• Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction (File)

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• Context-aware geometric deep learning for protein sequence design (File)

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• Scalable emulation of protein equilibrium ensembles with generative deep learning (File)

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14 October - 20 October

• Deep learning-based joint sequence–structure de novo membrane protein design (File)

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• Optional Reading Material for a more in-depth understanding about Protein Design (Folder)

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• An evolution-based model for designing chorismate mutase enzymes (File)

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• AI-based structure prediction empowers integrative structural analysis of human nuclear pores (File)
• Give also a look to the NPC special issue of Science (URL)

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• Simulating 500 million years of evolution with a language model (File)

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• Project introduction (File)
• Web based Protein Design cheat sheet (File)

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