Scientific literature analysis in computational molecular biology

General Information

• Google Docs to Protein Design Project (URL)
• Protein Design Project (File)
• News forum (Forum)
• Room listDateRoom25.09.AI.1.14202.10.AI.1.14209.10... (Text and media area)
• Template Reports (Folder)

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• Slides of intro lecture (File)

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• Highly accurate protein structure prediction with AlphaFold (File)

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• An evolution-based model for designing chorismate mutase enzymes (File)

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• De novo protein design by deep network hallucination (File)

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• ProteinMPNN (File)

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14 October - 20 October

• AI-based structure prediction empowers integrative structural analysis of human nuclear pores (File)
• Give also a look to the NPC special issue of Science (URL)

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• De novo design of protein structure and function with RFdiffusion (File)
• RFDiffusion - Supplement (URL)

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• Atomically accurate de novo design of single-domain antibodies (URL)

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• Large language models generate functional protein sequences across diverse families (File)

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• Structural basis of efficacy-driven ligand selectivity at GPCRs (File)

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• Predicting equilibrium distributions for molecular systems with deep learning (File)

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• Pharmacogenomics of GPCR Drug Targets (File)

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