Image Processing for Life Science

BIO-695

Homework - Liver Segmentation

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Description

Slides for assignment

Using ilastik : Pixel Classification

  • 3 categories at least:

    • 1st  - Normal Cytoplasm

    • 2nd - Vesicular Cytoplasm

    • 3rd  - Large Vesicles

    • … maybe more ?

  • Submit a single Zip file containing

  1. The ilastik project file (.ilp)

  2. A paragraph method to explain your drawing choices

  3. Probability maps (images) [optional]