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## S

samplePlot() - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Create a sample plot.
samplePlot() - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Do nothing in this base class.
saveBrainToFile(String) - Method in class uchicago.src.repastdemos.neuralfromfile.TrainedEmployee
  saves this agent's neural network to a file
saveCharts(String, ArrayList) - Static method in class uchicago.src.sim.analysis.ChartArchiver
  Saves the list of AbstractChartModels.
saveData() - Method in class uchicago.src.sim.engine.gui.components.RadioBarPanel
saveFrameData(String) - Static method in class uchicago.src.sim.gui.FrameFactory
  Saves the frame data for the specified model.
saveNetToFile(NeuralNet, String) - Static method in class uchicago.src.sim.adaptation.neural.NeuralUtils
  Saves a `NeuralNet` to the specified file.
saveNetToFile(String) - Method in class uchicago.src.sim.adaptation.neural.RepastNeuralWrapper
  Saves the neural network this is wrapping to the specified file.
schedule - Variable in class uchicago.src.repastdemos.enn.EnnBase
schedule(double, IAsynchAgent, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent.
schedule - Variable in class uchicago.src.sim.engine.BaseController
  The master schedule
schedule(double, Object, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
Schedule - Class in uchicago.src.sim.engine
  Manages the execution of BasicActions (ActionGroups, SimActions, and SimListActions) according to a simulation clock.
Schedule() - Constructor for class uchicago.src.sim.engine.Schedule
  Constructs a schedule that with a default execution interval of 1.
Schedule(double) - Constructor for class uchicago.src.sim.engine.Schedule
  Constructs a schedule that executes at the specified interval.
schedule - Variable in class uchicago.src.sim.engine.SimpleModel
scheduleActionAt(double, BasicAction) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to occur at the specified clock tick in RANDOM order.
scheduleActionAt(double, BasicAction, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to occur at the specified clock tick in the specified order.
scheduleActionAt(double, BasicAction, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to occur at the specified clock tick in the specified order.
scheduleActionAt(double, BasicAction, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to occur at the specified clock tick in RANDOM order.
scheduleActionAt(double, Object, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to occur at the specified clock tick.
scheduleActionAt(double, Object, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to occur at the specified clock tick.
scheduleActionAt(double, Object, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to occur at the specified clock tick in the specified order.
scheduleActionAt(double, Object, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to occur at the specified clock tick in the specified order.
scheduleActionAt(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAt(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAt(double, List, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAt(double, List, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAt(double, List, Class, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAt(double, List, Class, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAt(double, List, Class, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAt(double, List, Class, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAtEnd(BasicAction) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified action for the end of the simulation run.
scheduleActionAtEnd(Object, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on the specified object for the end of the simulation run.
scheduleActionAtEnd(List, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for the end of the simulation.
scheduleActionAtEnd(List, Class, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for the end of the simulation.
scheduleActionAtEndRnd(List, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for the end of the simulation.
scheduleActionAtEndRnd(List, Class, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for the end of the simulation.
scheduleActionAtInterval(double, BasicAction) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedule the specified BasicAction to execute at the specified interval, (e.g. every 3 clock ticks).
scheduleActionAtInterval(double, BasicAction, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedule the specified BasicAction to execute at the specified interval, (e.g. every 3 clock ticks).
scheduleActionAtInterval(double, BasicAction, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedule the specified BasicAction to execute at the specified interval, (e.g. every 3 clock ticks) in the specified order.
scheduleActionAtInterval(double, BasicAction, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedule the specified BasicAction to execute at the specified interval, (e.g. every 3 clock ticks) in the specified order.
scheduleActionAtInterval(double, Object, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object at the specified interval, (e.g. every 3 clock ticks).
scheduleActionAtInterval(double, Object, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object at the specified interval, (e.g. every 3 clock ticks) in the specified order.
scheduleActionAtInterval(double, Object, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object at the specified interval, (e.g. every 3 clock ticks).
scheduleActionAtInterval(double, Object, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object at the specified interval, (e.g. every 3 clock ticks) in the specified order.
scheduleActionAtInterval(double, List, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtInterval(double, List, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtInterval(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtInterval(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtInterval(double, List, Class, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks) in the specified order.
scheduleActionAtInterval(double, List, Class, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks) in the specified order.
scheduleActionAtIntervalRnd(double, List, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtIntervalRnd(double, List, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtIntervalRnd(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtIntervalRnd(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval.
scheduleActionAtIntervalRnd(double, List, Class, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks).
scheduleActionAtIntervalRnd(double, List, Class, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks).
scheduleActionAtIntervalRnd(double, List, Class, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks) in the specified order.
scheduleActionAtIntervalRnd(double, List, Class, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified interval (e.g. every three clock ticks) in the specified order.
scheduleActionAtPause(BasicAction) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified action for a pause in the simulation run.
scheduleActionAtPause(Object, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on the specified object for a pause in the simulation run.
scheduleActionAtPause(List, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for a pause in the simulation.
scheduleActionAtPause(List, Class, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for a pause in the simulation.
scheduleActionAtPauseRnd(List, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for a pause in the simulation.
scheduleActionAtPauseRnd(List, Class, String) - Method in class uchicago.src.sim.engine.Schedule
  Schedules the execution of the specified method on every object in the specified List for a pause in the simulation.
scheduleActionAtRnd(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAtRnd(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAtRnd(double, List, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAtRnd(double, List, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAtRnd(double, List, Class, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAtRnd(double, List, Class, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick.
scheduleActionAtRnd(double, List, Class, String, ScheduleBase.Order) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionAtRnd(double, List, Class, String, ScheduleBase.Order, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur at the specified clock tick in the specified order.
scheduleActionBeginning(double, BasicAction) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to execute starting at the specified clock tick and every tick thereafter.
scheduleActionBeginning(double, BasicAction, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the specified BasicAction to execute starting at the specified clock tick and every tick thereafter.
scheduleActionBeginning(double, Object, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to start at the specified clock tick and continue every tick thereafter.
scheduleActionBeginning(double, Object, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on the specified object to start at the specified clock tick and continue every tick thereafter.
scheduleActionBeginning(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginning(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginning(double, List, Class, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginning(double, List, Class, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginningRnd(double, List, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginningRnd(double, List, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginningRnd(double, List, Class, String) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleActionBeginningRnd(double, List, Class, String, double) - Method in class uchicago.src.sim.engine.ScheduleBase
  Schedules the execution of the specified method on every object in the specified List to occur beginning at the specified clock tick and every tick thereafter.
scheduleAfterWaiting(String) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent after a certain waiting period.
scheduleAfterWaiting(String, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent after a certain waiting period.
scheduleAfterWaiting(String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent after a certain waiting period.
scheduleAfterWaiting(String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent after a certain waiting period.
scheduleAfterWaiting(IAsynchAgent, String) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent after a certain waiting period.
scheduleAfterWaiting(IAsynchAgent, String, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent after a certain waiting period.
scheduleAfterWaiting(IAsynchAgent, String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent after a certain waiting period.
scheduleAfterWaiting(IAsynchAgent, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent after a certain waiting period.
scheduleAt(double, String) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent at a certain time.
scheduleAt(double, String, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent at a certain time.
scheduleAt(double, String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent at a certain time.
scheduleAt(double, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent at a certain time.
scheduleAt(double, IAsynchAgent, String) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent at a certain time.
scheduleAt(double, IAsynchAgent, String, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent at a certain time.
scheduleAt(double, IAsynchAgent, String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent at a certain time.
scheduleAt(double, IAsynchAgent, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called on an agent at a certain time.
scheduleAt(double, Object, String) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleAt(double, Object, String, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleAt(double, Object, String, Object, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleAt(double, Object, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleAtEveryTick(Schedule) - Method in class uchicago.src.sim.engine.MovieScheduler
scheduleAtInterval(Schedule, int) - Method in class uchicago.src.sim.engine.MovieScheduler
scheduleAtInterval(Schedule, int) - Method in class uchicago.src.sim.engine.SnapshotScheduler
scheduleAtPauseAndEnd(Schedule) - Method in class uchicago.src.sim.engine.MovieScheduler
scheduleAtPauseAndEnd(Schedule) - Method in class uchicago.src.sim.engine.SnapshotScheduler
ScheduleBase - Class in uchicago.src.sim.engine
  Abstract base class for Schedule and SubSchedule.
ScheduleBase() - Constructor for class uchicago.src.sim.engine.ScheduleBase
  Constructs a schedule that with a default execution interval of 1.
ScheduleBase(double) - Constructor for class uchicago.src.sim.engine.ScheduleBase
  Constructs a schedule that executes at the specified interval.
ScheduleBase.Order - Class in uchicago.src.sim.engine
ScheduleGroup - Class in uchicago.src.sim.engine
  A specialized BasicAction containing other BasicActions.
ScheduleGroup(ActionQueue) - Constructor for class uchicago.src.sim.engine.ScheduleGroup
scheduleMovie(Schedule) - Method in class uchicago.src.sim.engine.gui.MakeMovieDialog
scheduleNow(String) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called on this agent after a cerain waiting period.
scheduleNow(String, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
scheduleNow(String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
scheduleNow(String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
scheduleNow(IAsynchAgent, String) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called now.
scheduleNow(IAsynchAgent, String, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called now.
scheduleNow(IAsynchAgent, String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called now.
scheduleNow(IAsynchAgent, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called now.
scheduleNow(Object, String) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleNow(Object, String, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleNow(Object, String, Object, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleNow(Object, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.CallBackSchedule
scheduleSnapshot(Schedule) - Method in class uchicago.src.sim.engine.gui.SnapshotDialog
scheduleTrigger(double, MouseTrap) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
scheduleWhenAvailable(String) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(String, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchAgent
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(IAsynchAgent, String) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(IAsynchAgent, String, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(IAsynchAgent, String, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called when the agent is next available.
scheduleWhenAvailable(IAsynchAgent, String, Object, Object, Object) - Method in class uchicago.src.sim.engine.AsynchSchedule
  Schedules a method to be called when the agent is next available.
scold(Boss) - Method in class uchicago.src.repastdemos.neural.Employee
screenCoordsToNormalizedCartesianCoords(double, double) - Method in class uchicago.src.repastdemos.asynchAgents.Consultant
screenCoordsToNormalizedCartesianCoords(double, double) - Method in class uchicago.src.repastdemos.genetic.Judge
second - Variable in class uchicago.src.collection.Pair
seed - Variable in class uchicago.src.sim.engine.SimpleModel
select(OMGraphic) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Notify the GRP that the OMGraphic has been selected.
select(OMGraphicList) - Method in class anl.repast.gis.display.RepastOMLayer
  Designate a list of OMGraphics as selected.
select(OMGraphicList) - Method in class anl.repast.gis.display.RepastOMMultiLayer
  Designate a list of OMGraphics as selected.
selectedItem - Variable in class uchicago.src.repastdemos.neuralfromfile.AgentSelectorDialog
selectPolygon(int, int, int, int, int, int) - Method in class uchicago.src.sim.gui.HexaDisplay2D
SEMICOLON - Static variable in interface uchicago.src.sim.parameter.rpl.RPLParserConstants
SEQ_GIF - Static variable in class uchicago.src.sim.analysis.AbstractChartModel
sequence - Variable in class uchicago.src.sim.analysis.NetSeqTableRow
SEQUENCE - Static variable in class uchicago.src.sim.analysis.plot.OpenGraph
Sequence - Interface in uchicago.src.sim.analysis
  Interface for objects that are the source of data to be plotted by a sequence graph.
SequenceChartModel - Class in uchicago.src.sim.analysis
  Model (MVC) used for GUI creation of OpenSequenceGraphs.
SequenceChartModel(SimModel) - Constructor for class uchicago.src.sim.analysis.SequenceChartModel
  Creates a SequenceChartModel associated with the specified SimModel.
SequenceSource - Class in uchicago.src.sim.analysis
  Data source for a Sequence created via the gui chart creator.
SequenceSource(Object) - Constructor for class uchicago.src.sim.analysis.SequenceSource
  Creates a SequenceSource whose data is feed from the specified object.
SEQUENTIAL - Static variable in class uchicago.src.sim.engine.ActionGroup
  Sequential type
set(int, int, byte) - Method in class uchicago.src.collection.BitMatrix2D
  Sets the value of the specified cell.
set(int, int, byte) - Method in class uchicago.src.collection.ByteMatrix2D
  Sets the value of the specified cell.
SET - Static variable in class uchicago.src.reflector.Introspector
set(int, Object) - Method in class uchicago.src.sim.engine.DefaultGroup
set(int, int, byte) - Method in class uchicago.src.sim.network.AdjacencyBitMatrix
  Sets a data value in this matrix.
set(int, int, double) - Method in class uchicago.src.sim.network.AdjacencyBitMatrix
  Sets a data value in this matrix.
set(int, int, byte) - Method in class uchicago.src.sim.network.AdjacencyByteMatrix
  Sets a data value in this matrix.
set(int, int, double) - Method in class uchicago.src.sim.network.AdjacencyByteMatrix
  Sets a data value in this matrix.
set(int, int, double) - Method in class uchicago.src.sim.network.AdjacencyDoubleMatrix
  Sets a data value in this matrix.
set(int, int, double) - Method in interface uchicago.src.sim.network.AdjacencyMatrix
  Sets a data value in this matrix.
SET - Static variable in class uchicago.src.sim.parameter.ParameterLexer
set(int, Object) - Method in class uchicago.src.sim.util.ConservationCollection
SET_LIST - Static variable in class uchicago.src.sim.parameter.ParameterLexer
setAgentList(List) - Method in class anl.repast.gis.display.RepastOMLayer
  set the list of OpenMapAgents used by the layer
setAgentList(List) - Method in class anl.repast.gis.display.RepastOMMultiLayer
  set the list of OpenMapAgents used by the layer
setAgentList(ArrayList) - Static method in class uchicago.src.sim.engine.AsynchAgent
setAgents(ArrayList) - Method in class uchicago.src.sim.util.AgentDistribution
setAgentToMove(OpenMapAgent) - Method in class anl.repast.gis.display.RepastOMLayer
setAgentToMove(MultiLayerOpenMapAgent) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setAllowLoops(boolean) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets the whether self-loops will be permitted in the constructed network.
setAlphaOrder(boolean) - Method in class uchicago.src.reflector.IntrospectPanel
setAnimateTransitions(boolean) - Method in class uchicago.src.sim.gui.FruchGraphLayout
  Sets whether the completed layout (and each component as it is finished) will smoothly transition to its new location.
setAnimateTransitions(boolean) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets whether the completed layout (and each component as it is finished) will smoothly transition to its new location.
setAParameterData(ParameterData) - Method in class uchicago.src.sim.engine.gui.components.ParameterDataObjectTableModel
setAParameterData(ParameterData) - Method in class uchicago.src.sim.engine.gui.ParameterWizard
setArea(float) - Method in class uchicago.src.repastdemos.rabbitPopulation.PopulationDensity
setAspiration(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setAspiration(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setAutoRecording(boolean) - Method in class uchicago.src.sim.engine.BatchController
  This determines if the BatchController will automatically record the parameters from the model at the end of a simulation run.
setAxisTitles(String, String) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the axis titles.
setBackEnabled(boolean) - Method in class uchicago.src.guiUtils.Wizard
setBackground(Color) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the background color.
setBackground(Color) - Method in class uchicago.src.sim.gui.DisplaySurface
  Sets the background color for this display
setBackgroundColor(Color) - Method in class uchicago.src.sim.gui.Painter
  Sets the background color.
setBars(double, double) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the width and offset of the bars.
setBars(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Turn bars on or off (for bar charts).
setBars(double, double) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Turn bars on and set the width and offset.
setBarWidth(double) - Method in class uchicago.src.sim.analysis.Histogram
  Sets the plot bar width in xaxis coordinates.
setBasicAction(BasicAction) - Method in interface uchicago.src.codegen.Stepper
setBDExample(boolean) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setBDExample(boolean) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setBirthRate(float) - Method in class uchicago.src.repastdemos.rabbitPopulation.Births
setBirths(double) - Method in class uchicago.src.repastdemos.rabbitPopulation.Births
setBlockHeader(String) - Method in interface uchicago.src.sim.analysis.BlockFileWriter
  Sets the block header for any data subsequently written via writeToFile (the block) until called again.
setBlockHeader(String) - Method in class uchicago.src.sim.analysis.DataFileWriter
  Sets a block header.
setBlockHeader(String) - Method in class uchicago.src.sim.analysis.ExcelFileWriter
  Sets the block header for subsequent writes.
setBody(String) - Method in class uchicago.src.codegen.MethodGenerator
setBody(BodyGenerator) - Method in class uchicago.src.codegen.MethodGenerator
setBorderColor(Color) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the border color for this DrawableItem.
setBorderColor(Color) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the border color for this NetworkDrawable.
setBorderColor(Color) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the border color for this DefaultDrawableNode.
setBorderWidth(int) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the border width for this DrawableItem.
setBorderWidth(int) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the border width for this NetworkDrawable.
setBorderWidth(int) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the border width for this DefaultDrawableNode.
setBossID(int) - Method in class uchicago.src.repastdemos.neural.Boss
setBounds(int, int, int, int) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Move and resize this component.
setBoxVisible(boolean) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets whether the text should be drawn enclosed in a retangle.
setButtons(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  If the argument is true, make a fill button visible at the upper right.
setBValue(float) - Method in class uchicago.src.repastdemos.enn.EnnBase
setCellDepth(int) - Method in class uchicago.src.sim.engine.BaseController
  Sets the display cell depth.
setCellHeight(int) - Method in class uchicago.src.sim.engine.BaseController
  Sets the display cell height.
setCellWidth(int) - Method in class uchicago.src.sim.engine.BaseController
  Sets the display cell width.
setChanged(boolean) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setCircleLayout(boolean) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets whether circleLayout will be called to arrange nodes before starting each layout.
setClickInterest(RepastGeometryOfInterest) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the RepastGeometryOfInterest as one that could possibly be in the process of being clicked upon.
setClustring(double) - Method in class uchicago.src.sim.network.RolfeNet
setCode(String) - Method in exception uchicago.src.sim.parameter.rpl.CompilerException
setColor(Color) - Method in class uchicago.src.guiUtils.ColorChooserPopup
setColor(Color) - Method in class uchicago.src.guiUtils.ColorIcon
setColor(Color) - Method in class uchicago.src.repastdemos.jain.JainEdge
setColor(Color) - Method in class uchicago.src.repastdemos.jiggle.JiggleEdge
setColor(Color) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewEdge
setColor(Color) - Method in class uchicago.src.sim.analysis.NetSeqTableRow
setColor(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  If the argument is false, draw the plot without using color (in black and white).
setColor(Color) - Method in class uchicago.src.sim.analysis.SequenceSource
  Sets the Color of the sequence created by this SequenceSource.
setColor(Color) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the color for this DrawableItem.
setColor(Color) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets color of this NetworkDrawable.
setColor(Color) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the color of the text and box.
setColor(Color) - Method in class uchicago.src.sim.network.DefaultDrawableEdge
  Sets the color of this DefaultDrawableEdge.
setColor(Color) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the color of this DefaultDrawableNode.
setColumn(double[]) - Method in class layout.TableLayout
  Adjusts the number and sizes of rows in this layout.
setColumn(int, double) - Method in class layout.TableLayout
  Adjusts the width of a single column in this layout.
setComment(String) - Method in class uchicago.src.sim.network.AbstractAdjacencyMatrix
  Associates a comment with this matrix (e.g. the tick count at which it was created.)
setComment(String) - Method in interface uchicago.src.sim.network.AdjacencyMatrix
  Associates a comment with this matrix (e.g. the tick count at which it was created.)
setComparator(Comparator) - Method in class uchicago.src.sim.space.AbstractNeighborhooder
setComparator(Comparator) - Method in interface uchicago.src.sim.space.Neighborhooder
setComparator(Comparator) - Method in class uchicago.src.sim.space.Object2DGrid
  Sets the comparator class used by the findMaximum and findMinimum methods.
setCompetitorCount(int) - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
setConfiguredParameterList(ArrayList) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setConnected(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  If the argument is true, then the default is to connect subsequent points with a line.
setConnected(boolean, int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  If the first argument is true, then by default for the specified dataset, points will be connected by a line.
setConnected(boolean) - Method in class uchicago.src.sim.analysis.Plot
  Whether or not all the points should be connected.
setConnected(boolean, int) - Method in class uchicago.src.sim.analysis.Plot
  Whether or not the points specific to some dataset should be connected.
setConnectRadius(int) - Method in class uchicago.src.sim.network.SquareLatticeNet
  Sets the "radius" of neighbors along the grid which additional connections will be generated to.
setConsoleErr(boolean) - Method in class uchicago.src.sim.engine.AbstractGUIController
setConsoleOut(boolean) - Method in class uchicago.src.sim.engine.AbstractGUIController
setConstraints(Component, TableLayoutConstraints) - Method in class layout.TableLayout
  Sets the constraints of a given component.
setConstVal(Object) - Method in class uchicago.src.sim.parameter.Parameter
setConsumeEvents(boolean) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  A flag to tell the interpreter to be selfish about consuming MouseEvents it receives.
setContent(boolean) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setController(IController) - Method in interface uchicago.src.sim.engine.SimModel
  Sets the controller for this simulation model
setController(IController) - Method in class uchicago.src.sim.engine.SimModelImpl
  Sets the controller associated with this model
setControllers(RemoteBatchController) - Method in class uchicago.src.sim.engine.HomeController
setCurLineX(int[]) - Method in class uchicago.src.sim.gui.SimGraphics
setCurLineY(int[]) - Method in class uchicago.src.sim.gui.SimGraphics
setCurrentMouseEvent(MouseEvent) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the last MouseEvent received.
setCurStrategy(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setDataSources(ArrayList) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the list of GuiChartDataSource objects.
setDataType(String) - Method in class uchicago.src.sim.engine.gui.model.DataParameter
setDataurl(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Deprecated.
setDeaths(double) - Method in class uchicago.src.repastdemos.rabbitPopulation.Deaths
setDebugStream(PrintStream) - Method in class uchicago.src.sim.parameter.rpl.RPLParserTokenManager
setDegreeHist(boolean) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setDelayMaximum(double) - Method in class uchicago.src.sim.engine.AsynchAgent
setDelayMinimum(double) - Method in class uchicago.src.sim.engine.AsynchAgent
setDelimeter(String) - Method in class uchicago.src.sim.analysis.AbstractDataSourceRecorder
  Sets the tabular data delimiter to the specified string.
setDelimeter(String) - Method in class uchicago.src.sim.analysis.DataRecorder
  Sets the column delimiter.
setDelimeter(String) - Method in interface uchicago.src.sim.analysis.DataSourceRecorder
  Sets the column delimiter.
setDelimiter(String) - Method in class uchicago.src.sim.analysis.SimData
  Sets the column delimiter.
setDelimiter(String) - Method in class uchicago.src.sim.analysis.SimDataNew
  Sets the column delimiter.
setDelta(double) - Method in class uchicago.src.sim.engine.AsynchSchedule
setDelta(double) - Method in class uchicago.src.sim.engine.CallBackSchedule
setDensity(double) - Method in class uchicago.src.repastdemos.rabbitPopulation.PopulationDensity
setDensity(double) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets the double of the desired density of the network (ratio of number of existing edges to the maximum possible number of edges).
setDensity(double) - Method in class uchicago.src.sim.network.RolfeNet
  Sets the double of the desired density of the network (ratio of number of existing edges to the maximum possible number of edges) Must be set before makeRolfeNet() is called.
setDesiredAmount(double) - Method in class uchicago.src.repastdemos.genetic.Judge
setDialog(JDialog) - Method in class uchicago.src.sim.engine.gui.ParameterWizard
setDiffusionConstant(double) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setDiffusionConstant(double) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setDiffusionConstant(double) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setDiffusionConstant(double) - Method in class uchicago.src.sim.space.Diffuse2D
  Sets the diffusion constant for this Diffuse2d space
setDimension(int, int) - Method in class uchicago.src.sim.network.SquareLatticeNet
setDisplay(DisplaySurface) - Method in class uchicago.src.sim.gui.LayoutWithDisplay
  Setting the display surface (or passing it with the constructor) allows the graph layout to update the display to show the algorithm's convergence within the current tick.
setDisplayMapping(int, int) - Method in class uchicago.src.sim.gui.Value2DDisplay
  Linear transform of states (doubles, floats, integers etc.) to colors for drawing. color = state / m + c
setDisplayMapping(int, int) - Method in class uchicago.src.sim.gui.Value2DHexaDisplay
  Linear transform of states (doubles, floats, integers etc.) to colors for drawing. color = state / m + c
setDisplaySurface(DisplaySurface) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the display surface associated with this SimGraphics instance.
setDistribution(AbstractDistribution) - Method in class uchicago.src.sim.util.AgentDistribution
setDocumentBase(URL) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Deprecated.
setDoShuffle(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setDrawable(NetworkDrawable) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the drawable for this DefaultNetworkNode.
setDrawableNoCopy(NetworkDrawable) - Method in class uchicago.src.sim.network.DefaultDrawableNode
setDrawDirected(boolean) - Method in class uchicago.src.sim.network.DefaultDrawableEdge
  Sets whether this DefaultDrawableEdge is drawn as directed or not.
setDrawEdgesFirst(boolean) - Method in class uchicago.src.sim.gui.Network2DDisplay
  Sets whether or not this draws the edges first and then the nodes over them.
setDrawingCoordinates(float, float, float) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the coordinates for the next drawing operation.
setDrawingParameters(int, int, int) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the parameters for the next drawing operation.
setDrawingParametersNoScale(int, int, int) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the parameters for the next drawing operation.
setDrawOnAddPoint(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
setEdgeClass(Class) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets the Class of edges to be used in constructing the network.
setEdgeClass(Class) - Method in class uchicago.src.sim.network.RolfeNet
  Sets the Class of edges to be used in constructing the network.
setEdgeClass(Class) - Method in class uchicago.src.sim.network.SquareLatticeNet
  Sets the Class of edges to be used in constructing the network.
setEmployeeCount(int) - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
setEmployeeCount(int) - Method in class uchicago.src.repastdemos.neural.NeuralModel
setEmployeeCount(int) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setEnabled(boolean) - Method in class uchicago.src.reflector.FileWidget
setEnabled(boolean) - Method in class uchicago.src.reflector.IntrospectPanel
setEnabled(boolean) - Method in interface uchicago.src.reflector.PropertyWidget
setEnabled(boolean) - Method in class uchicago.src.reflector.RangeWidget
setEnabled(boolean) - Method in class uchicago.src.sim.engine.ModelManipulator
  Enables or disables all the sliders, buttons, and checkboxes associated with this ModelManipulator.
setEnd(Object) - Method in class uchicago.src.sim.engine.gui.model.IncrementParameter
setEnd(double) - Method in class uchicago.src.sim.engine.gui.model.ValueParameter
  Deprecated.
setEnd(double) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the ending value of this parameter.
setEnd(Object) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the ending value to the specified value.
setEnd(Object) - Method in class uchicago.src.sim.parameter.Parameter
setEnhancedJTable(EnhancedJTable) - Method in class uchicago.src.sim.engine.gui.components.EnhancedTableModel
setEpochsPerIteration(int) - Method in class uchicago.src.sim.adaptation.neural.RepastNeuralWrapper
setEquation(CEquation) - Method in class uchicago.src.repastdemos.rabbitPopulation.Births
setEquation(CEquation) - Method in class uchicago.src.repastdemos.rabbitPopulation.Deaths
setEquation(CEquation) - Method in class uchicago.src.repastdemos.rabbitPopulation.PopulationDensity
setEquation(CEquation) - Method in class uchicago.src.repastdemos.rabbitPopulation.RabbitPopulation
setEquation(String) - Method in class uchicago.src.sim.math.CEquation
  Sets the equation to evalute.
setError(double) - Method in class uchicago.src.repastdemos.regression.Employee
setEvaporationRate(double) - Method in class uchicago.src.sim.space.Diffuse2D
  Sets the evaporation rate for this Diffuse2d space
setEvapRate(double) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setEvapRate(double) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setEvapRate(double) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setEvent(MouseEvent) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter.MouseTimerListener
setExitOnExit(boolean) - Method in class uchicago.src.sim.engine.BaseController
  Sets whether the simulation application should exit with a System.exit(0) call on exit (pressing the exit button), or dispose of all windows, release the model without killing this instance of the virtual machine.
setExitOnExit(boolean) - Method in interface uchicago.src.sim.engine.IController
  Sets whether the simulation application should exit with a System.exit(0) call on exit (pressing the exit button), or dispose of all windows, release the model without killing this instance of the virtual machine.
setExitOnExit(boolean) - Method in class uchicago.src.sim.engine.SimInit
  Sets whether the simulation application should exit with a System.exit(0) call on exit (pressing the exit button), or dispose of all windows, release the model without killing this instance of the virtual machine.
setExtends(String) - Method in class uchicago.src.codegen.ClassGenerator
setFeature(int, Feature) - Method in class anl.repast.gis.data.FeatureArrayList
setFeedFrom(Object) - Method in class uchicago.src.sim.analysis.SequenceSource
  Sets the Object that provides the data (via a method or a field) for this SequenceSource.
setFieldName(String) - Method in class anl.repast.gis.data.FieldNameAndType
setFieldName(String) - Method in class uchicago.src.sim.analysis.SequenceSource
  Sets the field name of the field from which this SequenceSource gets its data.
setFieldType(String) - Method in class anl.repast.gis.data.FieldNameAndType
setFile(String) - Method in class uchicago.src.sim.analysis.DataWriter
setFileName(String) - Method in exception uchicago.src.sim.parameter.rpl.CompilerException
setFirstVal(int) - Method in class uchicago.src.sim.event.SliderListener
setFloat(String) - Method in interface uchicago.src.sim.parameter.rpl.Node
setFloat(String) - Method in class uchicago.src.sim.parameter.rpl.SimpleNode
setFocus() - Method in class uchicago.src.reflector.IntrospectFrame
setFocus() - Method in class uchicago.src.reflector.IntrospectPanel
setFont(Font) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the font for the label
setFont(Font) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the label font for this NetworkDrawable.
setFont(Font) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the current font.
setFont(Font) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the label font for this DefaultDrawableNode.
setFontSize(int) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the font size of the text.
setForeground(Color) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the foreground color.
setFrame(OpenMapFrame) - Method in class anl.repast.gis.display.OpenMapDisplay
setFrameColor(Color) - Method in class uchicago.src.sim.gui.HexaDisplay2D
setFramed(boolean) - Method in class uchicago.src.sim.gui.HexaDisplay2D
setFrom(Node) - Method in class uchicago.src.sim.network.DefaultEdge
  Sets the from node.
setFrom(Node) - Method in interface uchicago.src.sim.network.Edge
  Sets the from node
setGisAgentIndex(int) - Method in class anl.repast.gis.DefaultGeotoolsAgent
setGisAgentIndex(int) - Method in class anl.repast.gis.DefaultGisAgent
setGisAgentIndex(int) - Method in class anl.repast.gis.DefaultOpenMapAgent
setGisAgentIndex(int) - Method in interface anl.repast.gis.GisAgent
setGisAgentIndex(int) - Method in class uchicago.src.repastdemos.openmap.CircleAgent
setGisAgentIndex(int) - Method in class uchicago.src.repastdemos.openmap.PointAgent
setGisAgentIndex(int) - Method in class uchicago.src.repastdemos.openmap.URLRasterLocationAgent
setGoalAmountInDollars(double) - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
setGraphics(Graphics2D) - Method in class uchicago.src.sim.gui.SimGraphics
  Sets the wrapped graphics2D
setGrid(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Control whether the grid is drawn.
setGridDensity(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setGridSize(int) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setGRP(GestureResponsePolicy) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the GestureResponsePolicy to notify of the mouse actions over the layer's OMGraphicList.
setHappyPlay(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setHasRun(boolean) - Method in class uchicago.src.sim.analysis.NetSeqTableRow
setHeader(String) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets an optional header for the displayed text.
setHeight(int) - Method in class uchicago.src.repastdemos.asynchAgents.Office
setHeight(int) - Method in class uchicago.src.repastdemos.genetic.CompetitionSpace
setHeight(int) - Method in class uchicago.src.repastdemos.life.LifeModel
setHeight(int) - Method in class uchicago.src.repastdemos.neural.Office
setHeight(int) - Method in class uchicago.src.repastdemos.regression.Office
setHeight(int) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the height of this DrawableItem in screen coordinates.
setHeight(int) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the height of this NetworkDrawable.
setHeight(int) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the height of this DefaultDrawableNode.By default this will be ignored and the DefaultDrawableNode will be sized to fit its label.
setHexagons() - Method in class uchicago.src.sim.gui.HexaDisplay2D
setHighlightColor(Color) - Method in class anl.repast.gis.display.OpenMapDisplay
setHighlightFillPaint(Paint) - Method in class anl.repast.gis.display.RepastOMLayer
setHighlightFillPaint(Paint) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setHollow(boolean) - Method in class uchicago.src.sim.gui.DrawableItem
setID(int) - Method in class uchicago.src.sim.engine.AsynchAgent
setIdealTemp(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setIdealTemp(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setImplements(String) - Method in class uchicago.src.codegen.ClassGenerator
setImpulses(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  If the argument is true, then a line will be drawn from any plotted point down to the x axis.
setImpulses(boolean, int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  If the first argument is true, then a line will be drawn from any plotted point in the specified dataset down to the x axis.
setIncr(double) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the increment value of this parameter.
setIncr(Object) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the increment value to the specified value.
setIncr(Object) - Method in class uchicago.src.sim.parameter.Parameter
setIncrement(Object) - Method in class uchicago.src.sim.engine.gui.model.IncrementParameter
setIncrement(double) - Method in class uchicago.src.sim.engine.gui.model.ValueParameter
  Deprecated.
setInfinite(boolean) - Method in class uchicago.src.repastdemos.life.LifeModel
setInfo(Object) - Method in interface uchicago.src.sim.parameter.rpl.Node
setInfo(Object) - Method in class uchicago.src.sim.parameter.rpl.SimpleNode
setInitialPattern(LifeModel.ISetup) - Method in class uchicago.src.repastdemos.life.LifeModel
setInitialPopulation(double) - Method in class uchicago.src.repastdemos.rabbitPopulation.RabbitPopulationModel
setInput(boolean) - Method in class uchicago.src.sim.engine.gui.model.DataParameter
setInput(boolean) - Method in class uchicago.src.sim.parameter.Parameter
setInputParameterList(ArrayList) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setInputParameterList(JList) - Method in class uchicago.src.sim.engine.gui.components.ParameterWizardPanel
setInteger(String, int) - Method in interface uchicago.src.sim.parameter.rpl.Node
setInteger(String, int) - Method in class uchicago.src.sim.parameter.rpl.SimpleNode
setIntervalTime(double) - Method in class uchicago.src.sim.engine.BasicAction
setIterations(long) - Method in class uchicago.src.sim.engine.SubSchedule
  Deprecated. Sets the number of iterations of this SubSchedule's action per tick of the parent Schedule.
setLabel(String) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the label.
setLabel(String) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the label for this NetworkDrawable.
setLabel(String) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated.
setLabel(String) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated.
setLabel(String) - Method in class uchicago.src.sim.network.DefaultEdge
  Sets the label for this Edge
setLabel(String) - Method in interface uchicago.src.sim.network.Edge
  Sets the label for this edge
setLabelColor(Color) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the label color.
setLabelColor(Color) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets label color for this NetworkDrawable.
setLabelColor(Color) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets label color for this DefaultDrawableNode.
setLabelFont(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the label font, which is used for axis labels and legend labels.
setLatitude(float) - Method in class uchicago.src.repastdemos.openmap.PointAgent
setLatLon(float, float) - Method in class uchicago.src.repastdemos.openmap.CircleAgent
setLatLon(float, float) - Method in class uchicago.src.repastdemos.openmap.URLRasterLocationAgent
setLayer(OMGraphicHandlerLayer) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
setLayerHandler(LayerHandler) - Method in class anl.repast.gis.display.OpenMapDisplay
setLayers(Layer[]) - Method in class anl.repast.gis.display.OpenMapDisplay
setLayoutType(String) - Method in class uchicago.src.repastdemos.jain.JainModel
setLayoutType(String) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setLengthOfHistory(int) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setLifeTime(float) - Method in class uchicago.src.repastdemos.rabbitPopulation.Deaths
setLine(int) - Method in exception uchicago.src.sim.parameter.rpl.CompilerException
setLineCol(int, int) - Method in class uchicago.src.sim.parameter.rpl.RPLDottedName
  Sets where this RPLDottedName was defined in the source file by line and col.
setLinkProb(double) - Method in class uchicago.src.repastdemos.jain.JainModel
setLinksVisible(boolean) - Method in class uchicago.src.sim.gui.Network2DDisplay
  Shows or hides links depending on the value of parameter isVisible.
setLinksVisible(boolean) - Method in class uchicago.src.sim.gui.Network2DGridDisplay
  Shows or hides links depending on the value of parameter isVisible.
setList(List) - Method in class uchicago.src.sim.gui.AbstractGraphLayout
  Sets the list of nodes to be laid out by this GraphLayout.
setList(List) - Method in interface uchicago.src.sim.gui.GraphLayout
  Sets the list of nodes to be laid out by this GraphLayout.
setList(Vector) - Method in class uchicago.src.sim.parameter.NumericParameter
setList(Vector) - Method in class uchicago.src.sim.parameter.Parameter
setLoadFromFile(boolean) - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setLoadGui(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setLocation(float, float) - Method in class uchicago.src.repastdemos.hypercycles.HyperCell
setLocation(int, int) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the screen location for this OpenGraph.
setLocation(int, int) - Method in class uchicago.src.sim.gui.DisplaySurface
  Sets the screen location for this OpenGraph.
setLocator(MediaLocator) - Method in class uchicago.src.sim.gui.BufferDataSource
setLongitude(float) - Method in class uchicago.src.repastdemos.openmap.PointAgent
setMapBean(MapBean) - Method in class anl.repast.gis.display.OpenMapDisplay
setMapHandler(MapHandler) - Method in class anl.repast.gis.display.OpenMapDisplay
setMapPanel(BasicMapPanel) - Method in class anl.repast.gis.display.OpenMapDisplay
setMapScale(float) - Method in class anl.repast.gis.display.OpenMapDisplay
  set the scale of the map display
setMarksStyle(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Set the marks style to "none", "points", "dots", or "various".
setMarksStyle(String, int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Set the marks style to "none", "points", "dots", or "various" for the specified dataset.
setMarkStyle(int) - Method in class uchicago.src.sim.analysis.SequenceSource
  Returns the mark style (the shape of the point) for this SequenceSource.
setMarkType(int) - Method in class uchicago.src.sim.analysis.NetSeqTableRow
setMatrix(DenseDoubleMatrix2D) - Method in class uchicago.src.sim.network.AdjacencyBitMatrix
  Copies the matrix elements from the specified DenseDoubleMatrix2D.
setMatrix(byte[][]) - Method in class uchicago.src.sim.network.AdjacencyBitMatrix
  Sets the matrix for this AdjacencyByteMatrix to the specified byte[][].
setMatrix(DenseDoubleMatrix2D) - Method in class uchicago.src.sim.network.AdjacencyByteMatrix
  Copies the matrix elements from the specified DenseDoubleMatrix2D and casts them into bytes.
setMatrix(byte[][]) - Method in class uchicago.src.sim.network.AdjacencyByteMatrix
  Sets the matrix for this AdjacencyByteMatrix to the specified byte[][].
setMatrix(DenseDoubleMatrix2D) - Method in class uchicago.src.sim.network.AdjacencyDoubleMatrix
  Sets the actual matrix for this AdjacencyMatrix.
setMatrix(double[][]) - Method in class uchicago.src.sim.network.AdjacencyDoubleMatrix
  Sets the actual matrix for this AdjacencyMatrix.
setMatrix(DenseDoubleMatrix2D) - Method in interface uchicago.src.sim.network.AdjacencyMatrix
  Sets the actual matrix for this AdjacencyMatrix.
setMatrixLabel(String) - Method in class uchicago.src.sim.network.AbstractAdjacencyMatrix
  Sets the label for this matrix.
setMatrixLabel(String) - Method in interface uchicago.src.sim.network.AdjacencyMatrix
  Sets the label for this matrix.
setMaxAge(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
setMaxDeathAge(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMaxDegree(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setMaxDistance(double) - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
setMaxIdealTemp(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setMaxIdealTemp(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setMaxIdealTemp(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setMaxInitialSugar(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMaxMetabolism(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMaxOutputHeat(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setMaxOutputHeat(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setMaxOutputHeat(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setMaxPasses(int) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets the maximum number of passes the inner loop of the KK algorithm will execute.
setMaxTriggerDistance(int) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setMaxTriggerTime(int) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setMaxVision(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMetabolism(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
setMethod - Variable in class uchicago.src.sim.parameter.rpl.AbstractRPLParameter
setMethodName(String) - Method in class uchicago.src.sim.analysis.SequenceSource
  Sets the name of the method that is the source of the data for this SequenceSource
setMinDeathAge(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMinEpsilon(double) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets the minimum "spring" energy which the layout attempts to achieve.
setMinIdealTemp(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setMinIdealTemp(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setMinIdealTemp(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setMinInitialSugar(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setMinOutputHeat(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setMinOutputHeat(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setMinOutputHeat(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setMode(int) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setModel(SimModel) - Method in class anl.repast.gis.display.OpenMapDisplay
  Sets the SimModel to associate with this OpenMapDisplay.
setModel(AbstractChartModel) - Method in interface uchicago.src.sim.analysis.ChartGuiPanel
setModel(AbstractChartModel) - Method in class uchicago.src.sim.analysis.DataSourcePropPanel
setModel(AbstractChartModel) - Method in class uchicago.src.sim.analysis.DataSourcesPanel
setModel(AbstractChartModel) - Method in class uchicago.src.sim.analysis.PropertiesPanel
setModel(SimModel) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Sets the model that is controlled by this Controller.
setModel(SimModel) - Method in class uchicago.src.sim.engine.AsynchAgent
setModel(SimModel) - Method in class uchicago.src.sim.engine.BaseController
  Sets the model associated with this controller.
setModel(SimModel) - Method in class uchicago.src.sim.engine.BatchController
  Sets the model to be controlled by this BatchController.
setModel(SimModel) - Method in class uchicago.src.sim.engine.Controller
  Sets the model that is controlled by this Controller.
setModel(SimModel) - Method in interface uchicago.src.sim.engine.IController
  Sets the SimModel to be executed by this IController.
setModel(SimModel) - Method in class uchicago.src.sim.engine.RemoteBatchController
  Sets the model to be controlled by this BatchController.
setModel(SimModel) - Method in class uchicago.src.sim.parameter.rpl.RPLCompiler
  Sets the model associated with this RPLCompiler.
setModelClass(Class) - Method in class uchicago.src.sim.engine.RemoteBatchController
  Instantiate the model
setModelClass(String) - Method in class uchicago.src.sim.engine.RemoteBatchController
  Instantiate the model
setModelParameter(SimModel) - Method in class uchicago.src.sim.parameter.rpl.AbstractRPLParameter
  Sets the model parameter to the current value of this RPLParameter.
setModelParameter(SimModel) - Method in class uchicago.src.sim.parameter.rpl.BlockRPLParameter
  Sets the model parameter to the current values of the child RPLParameter of this BlockRPLParameter.
setModelParameter(SimModel) - Method in interface uchicago.src.sim.parameter.rpl.RPLParameter
  Sets the model parameter to the current value of this RPLParameter.
setModelParameters(Introspector) - Method in class uchicago.src.sim.engine.HomeController
  Set the parameters in the remote model.
setModelParameters() - Method in class uchicago.src.sim.engine.RemoteBatchController
setModelParameters(SimModel) - Method in class uchicago.src.sim.parameter.DefaultParameterSetter
  Sets the parameters for the specified model.
setModelParameters(SimModel) - Method in interface uchicago.src.sim.parameter.ParameterSetter
  Sets the parameters for the specified model.
setModelParameters(SimModel) - Method in class uchicago.src.sim.parameter.rpl.RPLParameterSetter
  Sets the parameters for the specified model.
setMouseModeServiceList(String[]) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the ID's of the mouse modes that this interpreter should be listening to.
setMouseTimerInterval(int) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the time interval that the mouse timer waits before calling upateMouseMoved.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.repastdemos.life.InfiniteSpaceDisplay
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.HexaDisplay2D
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.Network2DDisplay
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.Object2DDisplay
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in interface uchicago.src.sim.gui.Probeable
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.Value2DDisplay
  Sets the new coordinates for specified moveable.
setMoveableXY(Moveable, int, int) - Method in class uchicago.src.sim.gui.VectorDisplay
  Sets the new coordinates for specified moveable.
setMoveFromPoint(LatLonPoint) - Method in class anl.repast.gis.display.RepastOMLayer
setMoveFromPoint(LatLonPoint) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setMovementInterest(RepastGeometryOfInterest) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set the RepastGeometryOfInterest for something that the mouse is over.
setMoveToPoint(Point) - Method in class anl.repast.gis.display.RepastOMLayer
setMoveToPoint(Point) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setMovieName(String, String) - Method in class anl.repast.gis.display.OpenMapDisplay
  Sets the name and type of a movie.
setMovieName(String, String) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the name and type of a movie.
setMovieName(String, String) - Method in class uchicago.src.sim.gui.DisplaySurface
  Sets the name and type of a movie.
setMovieName(String, String) - Method in interface uchicago.src.sim.gui.MediaProducer
setName(String) - Method in class uchicago.src.codegen.ClassGenerator
setName(String) - Method in class uchicago.src.sim.analysis.SequenceSource
  Sets the name of this SequenceSource.
setName(String) - Method in class uchicago.src.sim.engine.BasicAction
  Sets the name of this BasicAction.
setName(String) - Method in class uchicago.src.sim.engine.gui.model.DataParameter
setName(String) - Method in class uchicago.src.sim.parameter.Parameter
  Sets the name of this to the specified name.
setNameAndType(String, String) - Method in class anl.repast.gis.data.FieldNameAndType
setNeighbors(int[]) - Method in class anl.repast.gis.DefaultGeotoolsAgent
setNeighbors(int[]) - Method in class anl.repast.gis.DefaultGisAgent
setNeighbors(int[]) - Method in class anl.repast.gis.DefaultOpenMapAgent
setNeighbors(int[]) - Method in interface anl.repast.gis.GisAgent
setNeighbors(int[]) - Method in class uchicago.src.repastdemos.openmap.CircleAgent
setNeighbors(int[]) - Method in class uchicago.src.repastdemos.openmap.PointAgent
setNeighbors(int[]) - Method in class uchicago.src.repastdemos.openmap.URLRasterLocationAgent
setNet(NeuralNet) - Method in class uchicago.src.sim.adaptation.neural.RepastNeuralWrapper
setNeuralNetFileName(String) - Method in class uchicago.src.repastdemos.neuralfromfile.NeuralModelFromFile
setNextAvailableTime(double) - Method in class uchicago.src.sim.engine.AsynchAgent
setNextEnabled(boolean) - Method in class uchicago.src.guiUtils.Wizard
setNextModelParameters(SimModel) - Method in class uchicago.src.sim.parameter.DefaultParameterSetter
  Increments the parameters in this ParameterSetter and then sets the model's parameters.
setNextModelParameters(SimModel) - Method in interface uchicago.src.sim.parameter.ParameterSetter
  Increments the parameters in this ParameterSetter and then sets the model's parameters.
setNextModelParameters(SimModel) - Method in class uchicago.src.sim.parameter.rpl.RPLParameterSetter
  Increments the parameters in this ParameterSetter and then sets the model's parameters.
setNextTime(double) - Method in class uchicago.src.sim.engine.BasicAction
  Sets the next time (tick) this BasicAction will be executed.
setNextToFinish() - Method in class uchicago.src.guiUtils.Wizard
setNodeClass(Class) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets the Class of nodes to be used in constructing the network.
setNodeClass(Class) - Method in class uchicago.src.sim.network.RolfeNet
  Sets the Class of nodes to be used in constructing the network.
setNodeClass(Class) - Method in class uchicago.src.sim.network.SquareLatticeNet
  Sets the Class of nodes to be used in constructing the network Must be set beforemakeSquareLatticeNet() is called.
setNodeLabel(String) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated.
setNodeLabel(String) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated.
setNodeLabel(String) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the label for this DefaultDrawableNode.
setNodeLabel(String) - Method in class uchicago.src.sim.network.DefaultNode
  Sets the label for this node.
setNodeLabel(String) - Method in interface uchicago.src.sim.network.Node
setNodesVisible(boolean) - Method in class uchicago.src.sim.gui.Network2DDisplay
  Shows or hids nodes depending on the value of the parameter isVisible.
setNodesVisible(boolean) - Method in class uchicago.src.sim.gui.Network2DGridDisplay
  Shows or hids nodes depending on the value of the parameter isVisible.
setNoTimerOverOMGraphic(boolean) - Method in class anl.repast.gis.display.RepastMapMouseInterpreter
  Set whether to ignore the timer when movement is occuring over an OMGraphic.
setNotingCaller(boolean) - Method in class uchicago.src.sim.engine.AsynchSchedule
setNotingCaller(boolean) - Method in class uchicago.src.sim.engine.CallBackSchedule
setNType(int) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setNumAgents(int) - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
setNumAgents(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setNumBalls(int) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setNumberOfSkills(int) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setNumBugs(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setNumBugs(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setNumBugs(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setNumNodes(int) - Method in class uchicago.src.repastdemos.jain.JainModel
setNumNodes(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setNumOvals(int) - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setNumRects(int) - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setNumRuns(int) - Method in class uchicago.src.sim.engine.SimInit
  Sets the number of runs in a batch run.
setNumRuns(long) - Method in class uchicago.src.sim.parameter.Parameter
  Sets the number of runs associated with this parameter.
setNumSets(int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Deprecated.
setObjectList(Collection) - Method in class uchicago.src.sim.gui.Object2DDisplay
  Sets the list of objects to display.
setObjectList(ArrayList) - Method in class uchicago.src.sim.gui.Object2DHexaDisplay
  Sets the list of objects to display.
setOfficeHeight(int) - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
setOfficeHeight(int) - Method in class uchicago.src.repastdemos.neural.NeuralModel
setOfficeHeight(int) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setOfficeWidth(int) - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
setOfficeWidth(int) - Method in class uchicago.src.repastdemos.neural.NeuralModel
setOfficeWidth(int) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setOMGraphic(OMGraphic) - Method in class anl.repast.gis.DefaultGisAgent
setOMGraphic(OMGraphic) - Method in class anl.repast.gis.DefaultOpenMapAgent
setOMGraphic(OMGraphic) - Method in interface anl.repast.gis.OpenMapAgent
setOMGraphic(OMGraphic) - Method in class uchicago.src.repastdemos.openmap.CircleAgent
setOMGraphic(OMGraphic) - Method in class uchicago.src.repastdemos.openmap.PointAgent
setOMGraphic(OMGraphic) - Method in class uchicago.src.repastdemos.openmap.URLRasterLocationAgent
setOpenMap(OpenMap) - Method in class anl.repast.gis.display.OpenMapDisplay
setOutputHeat(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setOutputHeat(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setOutputLocation(String) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setOutputLocation(String) - Method in class uchicago.src.sim.engine.gui.components.ParameterWizardPanel
setOutputParameterList(ArrayList) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setPad(int) - Method in class uchicago.src.sim.gui.CircularGraphLayout
  Sets the number of pixels to shrink radius by.
setPad(int) - Method in class uchicago.src.sim.gui.FruchGraphLayout
  Sets the number of pixels to shrink radius by.
setPad(int) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets the number of pixels to shrink the effective window by.
setPad(int) - Method in class uchicago.src.sim.gui.RandomGraphLayout
  Sets the number of pixels to shrink radius by.
setParameterData(ParameterData) - Method in class uchicago.src.sim.engine.gui.components.ParameterWizardPanel
setParameterFile(String) - Method in class uchicago.src.sim.engine.gui.RepastParamPanel
  used to get the name of the file created by the parameter wizard
setParameterFile(String) - Method in class uchicago.src.sim.engine.LoadModelDialog
  Returns the parameter file name as a String.
setParameterFile(String) - Method in interface uchicago.src.sim.engine.ParameterFileListener
setParameterList(ArrayList) - Method in class uchicago.src.sim.engine.gui.components.ParameterData
setParameters() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Sets the parameters of this AbstractGUIController's SimModel to their default values, if any.
setParameterType(int) - Method in class uchicago.src.sim.parameter.Parameter
setParamWizardPanel(ParameterWizardPanel) - Method in class uchicago.src.sim.engine.gui.ParameterWizard
setParent(Parameter) - Method in class uchicago.src.sim.parameter.Parameter
  Sets the parent parameter of this parameter
setPastDiscount(float) - Method in class uchicago.src.sim.network.UniformReinforcement
setPause(int) - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
setPauseAt(int) - Method in class uchicago.src.sim.engine.BaseController
setPayoff(float) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setPayoff(float) - Method in interface uchicago.src.sim.games.GameAgent
  Sets the payoff for this agent.
setPayoff(int, int, float, float) - Method in class uchicago.src.sim.games.PayoffMatrix
setPayoffs(PayoffPair, PayoffPair, PayoffPair, PayoffPair) - Method in class uchicago.src.sim.games.Game
setPercentFull(float) - Method in class uchicago.src.repastdemos.life.LifeModel
setPercentLeft(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setPlot(boolean) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setPointLabels(String[]) - Method in class uchicago.src.sim.analysis.OpenArrayData
  Sets the point labels (labels for each x value)
setPointLabels(String[]) - Method in class uchicago.src.sim.analysis.OpenHistogramStat
  Sets the histogram labels (the x - axis legend).
setPointsPersistence(int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  Calling this method with a positive argument sets the persistence of the plot to the given number of points.
setPolynomimalCoefficient1(double) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setPolynomimalCoefficient2(double) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setPolynomimalCoefficient3(double) - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
setPop(float) - Method in class uchicago.src.repastdemos.jain.JainNode
setPopulation(double) - Method in class uchicago.src.repastdemos.rabbitPopulation.RabbitPopulation
setPrevStrategy(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setProbabilityRule(ProbabilityRule) - Method in class uchicago.src.sim.network.Linker
  Sets the ProbabilityRule used by this Linker.
setProducer(MediaProducer) - Method in interface uchicago.src.sim.engine.MediaScheduler
setProducer(MediaProducer) - Method in class uchicago.src.sim.engine.SnapshotScheduler
setPropertyHandler(PropertyHandler) - Method in class anl.repast.gis.display.OpenMapDisplay
setPropertyName(String) - Method in class uchicago.src.reflector.FileWidget
setPropertyName(String) - Method in class uchicago.src.reflector.PropertyButton
setPropertyName(String) - Method in class uchicago.src.reflector.PropertyCheckBox
setPropertyName(String) - Method in class uchicago.src.reflector.PropertyComboBox
setPropertyName(String) - Method in class uchicago.src.reflector.PropertyLabel
setPropertyName(String) - Method in class uchicago.src.reflector.PropertyTextField
setPropertyName(String) - Method in interface uchicago.src.reflector.PropertyWidget
setPropertyName(String) - Method in class uchicago.src.reflector.RangeWidget
setPropertyName(String) - Method in class uchicago.src.sim.math.CEquationPropertyWidget
setRandomDistribution(AbstractContinousDistribution) - Method in class uchicago.src.sim.engine.AsynchAgent
setRandomMoveProb(float) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setRandomMoveProb(float) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setRandomMoveProbability(float) - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
setRandomMoveProbability(float) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setRandomMoveProbability(float) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setRandomMoveProbability(float) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setRandomSeed(long) - Method in class uchicago.src.sim.engine.BaseController
  Sets the random seed for the current model.
setRandomSeed(int) - Method in class uchicago.src.sim.gui.FruchGraphLayout
  Sets the Random seed used in the intial random placement of the nodes.
setReader(Reader) - Method in interface uchicago.src.guiUtils.Tokenizer
setReciProb(double) - Method in class uchicago.src.sim.network.RolfeNet
setRecordCycleData(boolean) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setRemoveProb(double) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setReplacement(boolean) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setRescaleLayout(boolean) - Method in class uchicago.src.sim.gui.FruchGraphLayout
  Sets whether the completed layout will be resized to exactly fill the display window.
setRescaleLayout(boolean) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets whether the completed layout will be resized to exactly fill the display window.
setReuseDatasets(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  If the argument is true, then datasets with the same name are merged into a single dataset.
setRng(Uniform) - Method in class uchicago.src.sim.engine.ActionGroup
  Sets the random number generator used by this ActionGroup when randomizing the BasicActions to execute.
setRngSeed(long) - Method in interface uchicago.src.sim.engine.SimModel
  Sets the random number seed.
setRngSeed(long) - Method in class uchicago.src.sim.engine.SimModelImpl
  Sets the random number generator in Random to a new value.
setRngSeed(long) - Method in class uchicago.src.sim.engine.SimpleModel
  Sets the random number seed for this model, and recreates a uniform distribution with that seed.
setRow(double[]) - Method in class layout.TableLayout
  Adjusts the number and sizes of rows in this layout.
setRow(int, double) - Method in class layout.TableLayout
  Adjusts the height of a single row in this layout.
setRsub0(double) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setRsub1(double) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setRuns(int) - Method in class uchicago.src.sim.engine.gui.model.DataParameter
setSchedule(Schedule) - Method in class uchicago.src.repastdemos.openmap.OpenMapAgentsSampleModel
setSchedule(Schedule) - Method in class uchicago.src.sim.engine.BaseController
  Sets the schedule to be run by the controller.
setSchedule(Schedule) - Method in interface uchicago.src.sim.engine.IController
  Sets he Schedule of execution for the SimModel for this IController.
setSeed(long) - Static method in class uchicago.src.sim.util.Random
  Creates a new random number generator with the specified seed.
setSelected(boolean) - Method in class uchicago.src.sim.event.CheckBoxListener
setShow(boolean) - Method in class uchicago.src.sim.analysis.NetSeqTableRow
setShowCycles(boolean) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setSimModel(SimModel) - Method in class uchicago.src.sim.analysis.OpenStats
  Sets the simulation model.
setSize(int, int) - Method in class uchicago.src.guiUtils.Wizard
setSize(int, int) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the size of the plot.
setSize(int, int) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the size of the plot.
setSize(int, int) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the size of this DrawableItem in screen coordinates.
setSize(Dimension) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the size of this DrawableItem in screen coordinates.
setSize(int) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets the int for the size (number of nodes) in the network to be constructed.
setSize(int) - Method in class uchicago.src.sim.network.RolfeNet
  Sets the int for the size (number of nodes) in the network to be constructed.
setSkills(String) - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setSnapshotFileName(String) - Method in class anl.repast.gis.display.OpenMapDisplay
setSnapshotFileName(String) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
setSnapshotFileName(String) - Method in class uchicago.src.sim.gui.DisplaySurface
  Sets the snapshot file name.
setSnapshotFileName(String) - Method in interface uchicago.src.sim.gui.MediaProducer
setSomeList(ArrayList) - Method in class uchicago.src.sim.engine.gui.components.ArrayListListModel
setSpaceHeight(int) - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
setSpaceWidth(int) - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
setSpringConst(double) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets the "springiness" of the imaginary springs connecting the nodes.
setStart(Object) - Method in class uchicago.src.sim.engine.gui.model.IncrementParameter
setStart(double) - Method in class uchicago.src.sim.engine.gui.model.ValueParameter
  Deprecated.
setStart(double) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the start value of this parameter.
setStart(Object) - Method in class uchicago.src.sim.parameter.NumericParameter
  Sets the starting value to the specified value.
setStart(Object) - Method in class uchicago.src.sim.parameter.Parameter
setStartRemoveAfter(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setStartTime(double) - Method in class uchicago.src.sim.engine.AsynchSchedule
setStatsVisible(boolean) - Method in class uchicago.src.sim.analysis.Histogram
  Sets the statistics display on the plot to visible.
setStderrOn(boolean) - Method in class uchicago.src.sim.gui.RepastConsole
setStdoutOn(boolean) - Method in class uchicago.src.sim.gui.RepastConsole
setSteps(int) - Method in class uchicago.src.sim.network.RolfeNet
setStoppingTime(long) - Method in class uchicago.src.sim.engine.SimpleModel
  Sets the tick at which this model will stop.
setStoppingTime(double) - Method in class uchicago.src.sim.engine.SimpleModel
  Sets the tick at which this model will stop.
setStrategy(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setStrategy(int) - Method in interface uchicago.src.sim.games.GameAgent
  Sets the current strategy (GameAgent.LEFT or GameAgent.RIGHT)
setStrength(double) - Method in class uchicago.src.sim.network.DefaultEdge
  Sets the strength of this edge
setStrength(double) - Method in interface uchicago.src.sim.network.Edge
  Sets the strength of this edge
setString(String) - Method in interface uchicago.src.guiUtils.Tokenizer
setString(String, int) - Method in interface uchicago.src.sim.parameter.rpl.Node
setString(String, int) - Method in class uchicago.src.sim.parameter.rpl.SimpleNode
setSubRuns(long) - Method in class uchicago.src.sim.parameter.Parameter
setSugar(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
setSweepsPersistence(int) - Method in class uchicago.src.sim.analysis.plot.RepastPlot
  A sweep is a sequence of points where the value of X is increasing.
setSymmetric(boolean) - Method in class uchicago.src.sim.network.RandomDensityNet
  Sets whether the constructed network will be symmetric.
setTasksAssignedPerTick(int) - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
setTasksAssignedPerTick(int) - Method in class uchicago.src.repastdemos.asynchAgents.Boss
setTasksAssignedPerTick(int) - Method in class uchicago.src.repastdemos.asynchAgents.Office
setTextCoordinates(int, int) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the coordinates for displaying the lines of text.
setThe_geom(Geometry) - Method in class anl.repast.gis.DefaultGeotoolsAgent
setThe_geom(Geometry) - Method in interface anl.repast.gis.GeotoolsAgent
setTick(double) - Method in class uchicago.src.sim.engine.BatchEvent
settingsFrame - Variable in class uchicago.src.sim.engine.Controller
setTitle(String) - Method in class anl.repast.gis.display.RepastOMLayer
setTitle(String) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setTitle(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the title for the chart produced by this AbstractChartModel.
setTitle(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the title of the graph.
setTitleFont(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the title font.
setTo(Node) - Method in class uchicago.src.sim.network.DefaultEdge
  Sets the to node.
setTo(Node) - Method in interface uchicago.src.sim.network.Edge
  Sets the to Node
setTopPanel(JPanel) - Method in class uchicago.src.guiUtils.Wizard
setTrapDensity(double) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setTriggered(boolean) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrap
setTriggerProbability(double) - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setType(int) - Method in class uchicago.src.sim.analysis.MarkIcon
setType(BatchEvent.BatchEventType) - Method in class uchicago.src.sim.engine.BatchEvent
setType(String) - Method in class uchicago.src.sim.network.DefaultEdge
  Sets the type of this DefaultEdge.
setType(String) - Method in interface uchicago.src.sim.network.Edge
  Sets the type of this edge.
setUnhappiness(double) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setUnhappiness(double) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setUnhappyPlay(int) - Method in class uchicago.src.repastdemos.enn.EnnBase
setup() - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
  Sets up the model for the next run, clears out all the old employees and the old displays
setup() - Method in class uchicago.src.repastdemos.enn.EnnBatchModel
setup() - Method in class uchicago.src.repastdemos.enn.EnnModel
setup() - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
  Sets up the model for the next run, clears out all the old employees and the old displays
setup() - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
setup() - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setup() - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setup() - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setup() - Method in class uchicago.src.repastdemos.hypercycles.HyperModel
setup() - Method in class uchicago.src.repastdemos.jain.JainModel
setup() - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setup() - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setup() - Method in class uchicago.src.repastdemos.life.LifeModel
setup() - Method in class uchicago.src.repastdemos.mousetrap.MouseTrapModel
setup() - Method in class uchicago.src.repastdemos.neural.NeuralModel
  Sets up the model for the next run, clears out all the old employees and the old displays
setup() - Method in class uchicago.src.repastdemos.neuralfromfile.NeuralModelFromFile
setup() - Method in class uchicago.src.repastdemos.openmap.OpenMapAgentsSampleModel
setup() - Method in class uchicago.src.repastdemos.rabbitPopulation.RabbitPopulationModel
setup() - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
  Sets up the model for the next run, clears out all the old employees and the old displays
setup() - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setup() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Sets up this controller and is associated SimModel prior to a model run.
setup() - Method in class uchicago.src.sim.engine.Controller
setup() - Method in interface uchicago.src.sim.engine.SimModel
  Prepares a model for a new run, typically by deallocating objects or setting them to some reasonable default.
setup() - Method in class uchicago.src.sim.engine.SimpleModel
setUpdate(boolean) - Method in class uchicago.src.sim.gui.AbstractGraphLayout
setUpdate(boolean) - Method in interface uchicago.src.sim.gui.GraphLayout
  Sets whether the display will update or not when updateLayout is called.
setUpdateEveryN(int) - Method in class uchicago.src.repastdemos.jain.JainModel
setUpdateEveryN(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setUpdateEveryN(int) - Method in class uchicago.src.sim.gui.FruchGraphLayout
  If the layout has been passed a display to update, and updateEveryN is greater than 0, the layout will update the display after every Nth pass through the algorithm.
setUpdateEveryN(int) - Method in class uchicago.src.sim.gui.KamadaGraphLayout
  Sets how frequently the layout will be redrawn during algorithm convergence.
setupSchedule() - Method in class uchicago.src.sim.engine.BaseController
  Sets up the schedule thread.
setUtilizedTime(double) - Method in class uchicago.src.sim.engine.AsynchAgent
setVal(double) - Method in class uchicago.src.sim.gui.ProbeableNumber
  Sets the value of the number.
setVal(double) - Method in class uchicago.src.sim.util.DoubleWrapper
  Sets the double value that this wraps.
setValue(Object) - Method in class uchicago.src.reflector.FileWidget
setValue(Object) - Method in class uchicago.src.reflector.PairComboBox
setValue(Object) - Method in class uchicago.src.reflector.PropertyButton
setValue(Object) - Method in class uchicago.src.reflector.PropertyCheckBox
setValue(Object) - Method in class uchicago.src.reflector.PropertyComboBox
setValue(Object) - Method in class uchicago.src.reflector.PropertyLabel
setValue(Object) - Method in class uchicago.src.reflector.PropertyTextField
setValue(Object) - Method in interface uchicago.src.reflector.PropertyWidget
setValue(Object) - Method in class uchicago.src.reflector.RangeWidget
setValue(int) - Method in class uchicago.src.sim.engine.gui.components.RadioBarPanel
setValue(Object) - Method in class uchicago.src.sim.engine.gui.model.ConstantParameter
setValue(Object[]) - Method in class uchicago.src.sim.engine.gui.model.ListParameter
setValue(Object) - Method in class uchicago.src.sim.math.CEquationPropertyWidget
setValueAt(Object, int, int) - Method in class uchicago.src.sim.engine.gui.components.ParameterDataObjectTableModel
setVar(String) - Method in class uchicago.src.sim.util.AgentDistribution
setViewWindow(int, int, int, int) - Method in class uchicago.src.repastdemos.life.InfiniteSpaceDisplay
  Sets the origin and width of the window into the "infinite" space.
setVision(int) - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
setWaitingToMove(boolean) - Method in class anl.repast.gis.display.RepastOMLayer
setWaitingToMove(boolean) - Method in class anl.repast.gis.display.RepastOMMultiLayer
setWidth(int) - Method in class uchicago.src.repastdemos.asynchAgents.Office
setWidth(int) - Method in class uchicago.src.repastdemos.genetic.CompetitionSpace
setWidth(int) - Method in class uchicago.src.repastdemos.life.LifeModel
setWidth(int) - Method in class uchicago.src.repastdemos.neural.Office
setWidth(int) - Method in class uchicago.src.repastdemos.regression.Office
setWidth(int) - Method in class uchicago.src.sim.gui.DrawableItem
  Sets the width of this DrawableItem in screen coordinates.
setWidth(int) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the width of this NetworkDrawable.
setWidth(int) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the width of this DefaultDrawableNode.
setWorldXSize(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setWorldXSize(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setWorldXSize(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setWorldXSize(int) - Method in class uchicago.src.repastdemos.jain.JainModel
setWorldXSize(int) - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setWorldXSize(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setWorldYSize(int) - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
setWorldYSize(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
setWorldYSize(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
setWorldYSize(int) - Method in class uchicago.src.repastdemos.jain.JainModel
setWorldYSize(int) - Method in class uchicago.src.repastdemos.jiggle.JiggleModel
setWorldYSize(int) - Method in class uchicago.src.repastdemos.jinGirNew.JinGirNewModelII
setWrap(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Control whether the X axis is wrapped.
setWrapAround(boolean) - Method in class uchicago.src.sim.network.SquareLatticeNet
setWrite(boolean) - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
setWriteHeader(String, boolean) - Method in class uchicago.src.sim.analysis.DataFileHeader
  Sets whether the header should be written to the file.
setWriteHeader(String, boolean) - Method in class uchicago.src.sim.engine.BatchController
  Deprecated.
setX(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setX(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setX(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setX(double) - Method in interface uchicago.src.sim.gui.DrawableNonGridNode
  Sets the x coordinate for this node.
setX(int) - Method in interface uchicago.src.sim.gui.Moveable
setX(double) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the X coordinate for the NetworkDrawable.
setX(double) - Method in class uchicago.src.sim.gui.OvalNetworkItem
setX(double) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated. Sets the x coordinate.
setX(int) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated. Implements the moveable interface, setting the x coordinate to some integer value.
setX(double) - Method in class uchicago.src.sim.gui.RectNetworkItem
setX(double) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated. Sets the x coordinate.
setX(int) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated. Implements the moveable interface, setting the x coordinate to some integer value.
setX(double) - Method in class uchicago.src.sim.gui.RoundRectNetworkItem
setX(int) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the x coordinate for displaying text.
setX(double) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the x coordinate for this node.
setX(int) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Implements the moveable interface, setting the x coordinate to some integer value.
setXAutoExpand(boolean) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets whether the plot's x-axis scale will expand to include new points or not.
setXAxisTitle(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the x-axis title for the chart produced by this AbstractChartModel.
setXIncrement(double) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the amount to increase or decrease the x-axis scale when a x value is out of the range of the current scale.
setXLabel(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the label for the X (horizontal) axis.
setXLog(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Specify whether the X axis is drawn with a logarithmic scale.
setXRange(double, double) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets the initial range of the x-axis.
setXRange(double, double) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the initial range of the X-axis.
setXRange(double, double) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the X (horizontal) range of the plot.
setXRangeIncr(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the amount to increment the displayed x-axis range when autoscaling the the chart produced by this AbstractChartModel.
setXRangeIncr(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the amount to increment the displayed x-axis range when autoscaling the the chart produced by this AbstractChartModel.
setXRangeMax(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial maximum value for the x-axis of the chart produced by this AbstractChartModel.
setXRangeMax(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial maximum value for the x-axis of the chart produced by this AbstractChartModel.
setXRangeMin(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial minimum value for the x-axis of the chart produced by this AbstractChartModel.
setXRangeMin(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial minimum value for the x-axis of the chart produced by this AbstractChartModel.
setXScale(float) - Method in class uchicago.src.sim.gui.SimGraphics
setXTick(double, String) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Associates a label with a particular x-axis tick.
setXViewPolicy(OpenSequenceGraph.PolicyConstant) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets the view policy for the x-axis.
setXY(int, int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setXY(int, int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setXY(int, int) - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
setY(int) - Method in class uchicago.src.repastdemos.enn.EnnAgent
setY(int) - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
setY(int) - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
setY(double) - Method in interface uchicago.src.sim.gui.DrawableNonGridNode
  Sets the y coordinate for this node.
setY(int) - Method in interface uchicago.src.sim.gui.Moveable
setY(double) - Method in interface uchicago.src.sim.gui.NetworkDrawable
  Sets the Y coordinate for the NetworkDrawable.
setY(double) - Method in class uchicago.src.sim.gui.OvalNetworkItem
setY(double) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated. Sets the y coordinate.
setY(int) - Method in class uchicago.src.sim.gui.OvalNode
  Deprecated. Implements the moveable interface, setting the y coordinate to some integer value.
setY(double) - Method in class uchicago.src.sim.gui.RectNetworkItem
setY(double) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated. Sets the y coordinate.
setY(int) - Method in class uchicago.src.sim.gui.RectNode
  Deprecated. Implements the moveable interface, setting the y coordinate to some integer value.
setY(double) - Method in class uchicago.src.sim.gui.RoundRectNetworkItem
setY(int) - Method in class uchicago.src.sim.gui.TextDisplay
  Sets the Y coordinate for displaying text.
setY(double) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Sets the y coordinate for this node.
setY(int) - Method in class uchicago.src.sim.network.DefaultDrawableNode
  Implements the moveable interface, setting the y coordinate to some integer value.
setYAutoExpand(boolean) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets whether the plot's y-axis scale will expand to include new points or not.
setYAxisTitle(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the y-axis title for the chart produced by this AbstractChartModel.
setYIncrement(double) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the amount to increase or decrease the y-axis scale when a y value is out of the range of the current scale.
setYLabel(String) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the label for the Y (vertical) axis.
setYLog(boolean) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Specify whether the Y axis is drawn with a logarithmic scale.
setYRange(double, double) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets the initial range of the y-axis.
setYRange(double, double) - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Sets the initial range of the y-axis.
setYRange(double, double) - Method in class uchicago.src.sim.analysis.plot.RepastPlotBox
  Set the Y (vertical) range of the plot.
setYRangeIncr(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the amount to increment the displayed y-axis range when autoscaling the the chart produced by this AbstractChartModel.
setYRangeIncr(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the amount to increment the displayed y-axis range when autoscaling the the chart produced by this AbstractChartModel.
setYRangeMax(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial maximum value for the y-axis of the chart produced by this AbstractChartModel.
setYRangeMax(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial maximum value for the y-axis of the chart produced by this AbstractChartModel.
setYRangeMin(String) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial minimum value for the y-axis of the chart produced by this AbstractChartModel.
setYRangeMin(double) - Method in class uchicago.src.sim.analysis.AbstractChartModel
  Sets the initial minimum value for the y-axis of the chart produced by this AbstractChartModel.
setYScale(float) - Method in class uchicago.src.sim.gui.SimGraphics
setYValues(Vector, int) - Method in class uchicago.src.sim.analysis.OpenArrayData
  Sets a Vector of y values as a series
setYViewPolicy(OpenSequenceGraph.PolicyConstant) - Method in class uchicago.src.sim.analysis.OpenSequenceGraph
  Sets the view policy for the y-axis.
setZeroTransparent(boolean) - Method in class uchicago.src.sim.gui.Value2DDisplay
  Sets whether or not a zero value in space drawn by this grid is transparent or drawn according to the color map.
setZeroTransparent(boolean) - Method in class uchicago.src.sim.gui.Value2DHexaDisplay
  Sets whether or not a zero value in space drawn by this grid is transparent or drawn according to the color map.
shadowColor - Variable in class uchicago.src.guiUtils.ColorIcon
ShortArgInvoker - Class in uchicago.src.reflector
ShortArgInvoker(Object, Method, String) - Constructor for class uchicago.src.reflector.ShortArgInvoker
ShortestNetworkPath - Class in uchicago.src.sim.network
ShortestNetworkPath(List, DefaultNode) - Constructor for class uchicago.src.sim.network.ShortestNetworkPath
shouldSelectCell(EventObject) - Method in class uchicago.src.sim.engine.gui.components.RadioBarPanel
show(Collection, ActionListener) - Method in class uchicago.src.repastdemos.neuralfromfile.AgentSelectorDialog
  shows the dialog asking the user to select an agent
show - Variable in class uchicago.src.sim.analysis.NetSeqTableRow
SHOW_ALL - Static variable in class uchicago.src.sim.analysis.OpenSequenceGraph
SHOW_CHARTS - Static variable in class uchicago.src.sim.engine.AbstractGUIController
SHOW_FIRST - Static variable in class uchicago.src.sim.analysis.OpenSequenceGraph
SHOW_LAST - Static variable in class uchicago.src.sim.analysis.OpenSequenceGraph
showChartDialog(JFrame) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays a dialog for creating custom charts.
showError(Component, String, String) - Method in class uchicago.src.guiUtils.ErrorNotifier
showError(String, Exception) - Static method in class uchicago.src.sim.util.SimUtilities
  Displays an error message on the screen and prints the message and the exception message and stack trace to a .
showInternalFrameError(Component, String, String) - Method in class uchicago.src.guiUtils.ErrorNotifier
showLoadModelDialog(JFrame) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays the LoadModelDialog and loads the selected SimModel.
showMakeMovieDialog(JFrame) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays a dialog for creating movies of the simulation.
showMessage(String) - Static method in class uchicago.src.sim.util.SimUtilities
  Displays a message in a dialog box.
showSettings() - Method in class uchicago.src.sim.engine.Controller
showSnapshotDialog(JFrame) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays the dialog for taking snapshot images.
showStats - Variable in class uchicago.src.sim.analysis.Histogram
showVersion() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays a message box showing the version number of repast.
showView() - Method in class uchicago.src.sim.gui.ViewEvent
  Is this a show view event.
showWriteParamsDialog(JFrame) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Displays a dialog for writing the SimModel's parameters to a file.
SHP_POINT - Static variable in class anl.repast.gis.data.OpenMapData
SHP_POLYGON - Static variable in class anl.repast.gis.data.OpenMapData
SHP_POLYLINE - Static variable in class anl.repast.gis.data.OpenMapData
shuffle - Variable in class uchicago.src.repastdemos.enn.EnnBase
shuffle - Variable in class uchicago.src.sim.engine.SimpleModel
shuffle(List) - Static method in class uchicago.src.sim.util.SimUtilities
  Shuffles the specified list using Random.uniform.
shuffle(List, Uniform) - Static method in class uchicago.src.sim.util.SimUtilities
  Shuffles the specified list using the specifid Uniform rng.
shuffle(double[], Uniform) - Static method in class uchicago.src.sim.util.SimUtilities
  Shuffles the specified double[] using the specifid Uniform rng.
shuffleAgents() - Method in class uchicago.src.repastdemos.sugarscape.SugarModel
shutdown() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Exits the simulation but does not exit the jvm.
shutdown() - Method in class uchicago.src.sim.engine.Controller
SimAction - Class in uchicago.src.sim.engine
  Deprecated. No longer used now that bytecode is generated directly.
SimAction(Object, Method) - Constructor for class uchicago.src.sim.engine.SimAction
  Deprecated. Constructs a SimAction from the specified Object and Method.
SimData - Class in uchicago.src.sim.analysis
  Holds data in tabular format - a vector of vectors.
SimData(String, String, SimModel, boolean) - Constructor for class uchicago.src.sim.analysis.SimData
  Deprecated.
SimData(String, SimModel, boolean) - Constructor for class uchicago.src.sim.analysis.SimData
  Constructs a new SimData object from the model header, model and batch flag
SimData.SimDataIterator - Class in uchicago.src.sim.analysis
SimDataNew - Class in uchicago.src.sim.analysis
  Holds data in tabular format - a vector of vectors.
SimDataNew(String) - Constructor for class uchicago.src.sim.analysis.SimDataNew
  Constructs a new SimData object from the model header, model and batch flag
SimDataNew.SimDataIterator - Class in uchicago.src.sim.analysis
SimEvent - Class in uchicago.src.sim.engine
  A semantic event that indicates that the simulation run has paused or stopped.
SimEvent(Object, int) - Constructor for class uchicago.src.sim.engine.SimEvent
  Constructs a SimEvent with the specified source, and the specified id.
SimEventListener - Interface in uchicago.src.sim.engine
  The listener interface for those objects that want to listen for SimEvents.
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.analysis.AbstractDataSourceRecorder
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.analysis.DataRecorder
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.analysis.DistributedDataRecorder
simEventPerformed(SimEvent) - Method in interface uchicago.src.sim.analysis.Recorder
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.engine.AbstractGUIController
  Invoked by a source on which this is a listener when a `SimEvent` is fired.
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.engine.BatchController
  Called by a source on which this is a listener when a `SimEvent` is performed.
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.engine.Controller
  Invoked by a source on which this is a listener when a `SimEvent` is fired.
simEventPerformed(SimEvent) - Method in interface uchicago.src.sim.engine.SimEventListener
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.engine.ThinController
  Listens for SimEvents and responds accordingly.
simEventPerformed(SimEvent) - Method in class uchicago.src.sim.gui.DisplaySurface
  Repaints the display on a pause or a stop event.
SimEventProducer - Interface in uchicago.src.sim.engine
  Interface for those classes that wish to produce SimEvents.
simGraphics - Variable in class uchicago.src.sim.gui.Painter
SimGraphics - Class in uchicago.src.sim.gui
  A Wrapper around java.awt.Graphics2D.
SimGraphics() - Constructor for class uchicago.src.sim.gui.SimGraphics
SimInit - Class in uchicago.src.sim.engine
  Creates and initializes a simulation.
SimInit() - Constructor for class uchicago.src.sim.engine.SimInit
SimListAction - Class in uchicago.src.sim.engine
  Deprecated. No longer needed due to direct bytecode generation of BasicActions.
SimListAction(ArrayList, Method) - Constructor for class uchicago.src.sim.engine.SimListAction
  Deprecated. Constructs a SimListAction from the specified list and specified Method.
simModel - Variable in class uchicago.src.sim.analysis.AbstractChartModel
SimModel - Interface in uchicago.src.sim.engine
  Interface for all RePast models.
SimModelImpl - Class in uchicago.src.sim.engine
  A partial implementation of the SimModel interface.
SimModelImpl() - Constructor for class uchicago.src.sim.engine.SimModelImpl
  Constructs a SimModel and initializes the default random number generator in uchicago.src.sim.util.Random with the current timestamp (new java.util.Date()) as the seed.
simPanel - Variable in class uchicago.src.sim.engine.Controller
simple_stmt() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
SimpleCharStream - Class in uchicago.src.sim.parameter.rpl
  An implementation of interface CharStream, where the stream is assumed to contain only ASCII characters (without unicode processing).
SimpleCharStream(Reader, int, int, int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleCharStream(Reader, int, int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleCharStream(Reader) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleCharStream(InputStream, int, int, int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleCharStream(InputStream, int, int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleCharStream(InputStream) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleCharStream
SimpleModel - Class in uchicago.src.sim.engine
  Encapsulates some simple model behavoir and hides the scheduling mechansim.
SimpleModel() - Constructor for class uchicago.src.sim.engine.SimpleModel
SimpleNode - Class in uchicago.src.sim.parameter.rpl
SimpleNode(int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleNode
SimpleNode(RPLParser, int) - Constructor for class uchicago.src.sim.parameter.rpl.SimpleNode
simRun - Variable in class uchicago.src.sim.engine.BaseController
  The runnable that encapsulates the schedule and allows for threaded execution of the schedule
SimUtilities - Class in uchicago.src.sim.util
  Static Utility methods for RePast simulations.
SINGLE_LINE_COMMENT - Static variable in interface uchicago.src.sim.parameter.rpl.RPLParserConstants
SINGLE_STRING - Static variable in interface uchicago.src.sim.parameter.rpl.RPLParserConstants
SINGLE_STRING2 - Static variable in interface uchicago.src.sim.parameter.rpl.RPLParserConstants
singleCell - Variable in class layout.TableLayout.Entry
  Does the component occupy a single cell
size() - Method in interface uchicago.src.collection.BaseMatrix
size() - Method in class uchicago.src.collection.DoubleMatrix
size() - Method in class uchicago.src.collection.NewMatrix
size() - Method in class uchicago.src.collection.SparseObjectMatrix
size() - Method in class uchicago.src.sim.engine.ActionQueue
size() - Method in class uchicago.src.sim.engine.DefaultGroup
size() - Method in interface uchicago.src.sim.engine.Group
size() - Method in class uchicago.src.sim.engine.ScheduleGroup
size - Variable in class uchicago.src.sim.gui.Display2D
size - Variable in class uchicago.src.sim.gui.DisplaySurface
size() - Method in class uchicago.src.sim.network.NetworkPath
size() - Method in class uchicago.src.sim.space.BagCell
  Returns the number of objects in this cell.
size() - Method in interface uchicago.src.sim.space.Cell
  Returns the number of objects in this cell.
size() - Method in class uchicago.src.sim.space.OrderedCell
  Gets the number of objects in this cell.
size() - Method in class uchicago.src.sim.util.ConservationCollection
Skill - Class in uchicago.src.repastdemos.hypercycles
  A skill is a simple wrapper around an int and a HyperCell.
Skill(int, HyperCell) - Constructor for class uchicago.src.repastdemos.hypercycles.Skill
SLASH - Static variable in class uchicago.src.sim.parameter.ParameterLexer
sleepValue - Variable in class uchicago.src.sim.engine.BaseController
  The amount to pause while simRun is running, allowing other processing to occur.
SliderListener - Class in uchicago.src.sim.event
  Abstract implementation of a ChangeListener.
SliderListener() - Constructor for class uchicago.src.sim.event.SliderListener
SMALL - Static variable in interface uchicago.src.sim.network.NetworkConstants
small_stmt() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
SnapshotDialog - Class in uchicago.src.sim.engine.gui
  Dialog for taking snapshots.
SnapshotDialog(Vector) - Constructor for class uchicago.src.sim.engine.gui.SnapshotDialog
snapshotFile - Variable in class uchicago.src.sim.gui.DisplaySurface
  Filename for snapshots taken of this display surface.
SnapshotScheduler - Class in uchicago.src.sim.engine
SnapshotScheduler(String, MediaProducer, String) - Constructor for class uchicago.src.sim.engine.SnapshotScheduler
sortGisAgentsByIndex(Collection) - Method in class anl.repast.gis.data.GeotoolsData
  Sorts a Collection of GisAgents using the GisAgent's getGisAgentIndex function
sortGisAgentsbyIndex(Collection) - Method in class anl.repast.gis.data.OpenMapData
  Sorts a Collection of GisAgents using the GisAgent's getGisAgentIndex function
SOURCE - Static variable in class uchicago.src.repastdemos.hypercycles.HyperGame
source - Variable in class uchicago.src.sim.analysis.HistogramItem
sources - Variable in class uchicago.src.sim.analysis.AbstractDataSourceRecorder
space - Variable in class uchicago.src.repastdemos.enn.EnnBase
space - Variable in class uchicago.src.repastdemos.genetic.GeneticChangeModel
Space - Interface in uchicago.src.repastdemos.life
  Interface for spaces in the Life model.
space - Variable in class uchicago.src.sim.gui.VectorDisplay
SPACE - Static variable in interface uchicago.src.sim.parameter.rpl.RPLParserConstants
space - Variable in class uchicago.src.sim.space.AbstractNeighborhooder
SparseObjectMatrix - Class in uchicago.src.collection
SparseObjectMatrix(int, int) - Constructor for class uchicago.src.collection.SparseObjectMatrix
specialConstructor - Variable in exception uchicago.src.sim.parameter.rpl.ParseException
  This variable determines which constructor was used to create this object and thereby affects the semantics of the "getMessage" method (see below).
specialToken - Variable in class uchicago.src.sim.parameter.rpl.Token
  This field is used to access special tokens that occur prior to this token, but after the immediately preceding regular (non-special) token.
SQUARE - Static variable in class uchicago.src.sim.analysis.plot.OpenGraph
SQUARE - Static variable in class uchicago.src.sim.gui.Legend
SquareIcon - Class in uchicago.src.sim.gui
SquareIcon(Color, boolean) - Constructor for class uchicago.src.sim.gui.SquareIcon
SquareIcon(int, int, Color, boolean) - Constructor for class uchicago.src.sim.gui.SquareIcon
SquareLatticeNet - Class in uchicago.src.sim.network
  Creates a square lattice network.
SquareLatticeNet() - Constructor for class uchicago.src.sim.network.SquareLatticeNet
SquareLatticeNet(Class, Class) - Constructor for class uchicago.src.sim.network.SquareLatticeNet
SquareLatticeNet(Class, Class, int, int) - Constructor for class uchicago.src.sim.network.SquareLatticeNet
SquareLatticeNet(Class, Class, int, int, boolean, int) - Constructor for class uchicago.src.sim.network.SquareLatticeNet
Stapler - Class in uchicago.src.repastdemos.neural
  The class used to draw the goal of the agents (the stapler).
Stapler(Office) - Constructor for class uchicago.src.repastdemos.neural.Stapler
start - Variable in class uchicago.src.guiUtils.Token
start() - Method in class uchicago.src.sim.engine.BatchController
  Starts an individual run of the simulation
start() - Method in class uchicago.src.sim.engine.RemoteBatchController
start() - Method in class uchicago.src.sim.gui.BufferDataSource
START - Static variable in class uchicago.src.sim.parameter.ParameterLexer
START_EVENT - Static variable in class uchicago.src.sim.engine.SimEvent
startAt - Variable in class uchicago.src.sim.engine.SimpleModel
startMultRunsSim() - Method in class uchicago.src.sim.engine.Controller
  method called when the triple play button is pushed
startSim() - Method in class uchicago.src.sim.engine.BaseController
  Starts the simulation.
startSim() - Method in class uchicago.src.sim.engine.Controller
startSim() - Method in interface uchicago.src.sim.engine.IController
  Starts a simulation run.
startZoom(int, int, int, int) - Method in class uchicago.src.sim.gui.Network2DDisplay
startZoom(int, int, int, int) - Method in interface uchicago.src.sim.gui.Zoomable
STAT_UTIL_ERRORVAL - Static variable in class uchicago.src.sim.analysis.StatisticUtilities
StatCalculator - Class in uchicago.src.sim.engine
StatCalculator(List) - Constructor for class uchicago.src.sim.engine.StatCalculator
stateChanged(ChangeEvent) - Method in class uchicago.src.guiUtils.ColorCellEditor
stateChanged(ChangeEvent) - Method in class uchicago.src.sim.event.SliderListener
staticCreateDistribution(String, double[]) - Static method in class uchicago.src.sim.util.DistributionFactory
  Statically creates an Abstract Distribution.
staticFlag - Static variable in class uchicago.src.sim.parameter.rpl.SimpleCharStream
StatisticUtilities - Class in uchicago.src.sim.analysis
  Statistical utilities.
StatisticUtilities() - Constructor for class uchicago.src.sim.analysis.StatisticUtilities
step() - Method in interface uchicago.src.codegen.Stepper
step() - Method in class uchicago.src.repastdemos.asynchAgents.AsynchAgentsModel
step() - Method in class uchicago.src.repastdemos.genetic.Competitor
step() - Method in class uchicago.src.repastdemos.genetic.GeneticChangeModel
step() - Method in class uchicago.src.repastdemos.genetic.Judge
step() - Method in class uchicago.src.repastdemos.gisModel.GisBug
step() - Method in class uchicago.src.repastdemos.gisModel.GisBugsModel
step() - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
step() - Method in class uchicago.src.repastdemos.heatBugs.HeatBug
step() - Method in class uchicago.src.repastdemos.heatBugs.HeatBugsModel
step() - Method in class uchicago.src.repastdemos.hexabugs.HexaBug
step() - Method in class uchicago.src.repastdemos.hexabugs.HexaBugsModel
step(ArrayList) - Method in class uchicago.src.repastdemos.life.InfiniteLifeSpace
  Checks if any empty space is surrounded by 3 and only 3 LifeAgents, and if so then creates new LifeAgent there.
step() - Method in class uchicago.src.repastdemos.life.LifeAgent
  Check if the number of neighbors is > 3 or < 2 and die if so.
step() - Method in class uchicago.src.repastdemos.life.LifeModel
step(ArrayList) - Method in class uchicago.src.repastdemos.life.LifeSpace
  Iterates through each cell, if the cell is empty and has 3 neighbors then new agent there.
step(ArrayList) - Method in interface uchicago.src.repastdemos.life.Space
step() - Method in class uchicago.src.repastdemos.neural.Boss
step() - Method in class uchicago.src.repastdemos.neural.Consultant
step() - Method in class uchicago.src.repastdemos.neural.Employee
step() - Method in class uchicago.src.repastdemos.neural.NeuralModel
step() - Method in class uchicago.src.repastdemos.openmap.CircleAgent
step() - Method in class uchicago.src.repastdemos.openmap.OpenMapAgentsSampleModel
step() - Method in class uchicago.src.repastdemos.openmap.PointAgent
step() - Method in class uchicago.src.repastdemos.openmap.URLRasterLocationAgent
step() - Method in class uchicago.src.repastdemos.rabbitPopulation.RabbitPopulation
step() - Method in class uchicago.src.repastdemos.regression.Boss
step() - Method in class uchicago.src.repastdemos.regression.Employee
step() - Method in class uchicago.src.repastdemos.regression.RegressionOfficeModel
step() - Method in class uchicago.src.repastdemos.sugarscape.SugarAgent
step() - Method in class uchicago.src.sim.analysis.Histogram
  Histograms the data from the histogram items and updates the displayed graph.
step(double[]) - Method in class uchicago.src.sim.analysis.Histogram
  Histograms the specified double array and updates the graph.
step(DoubleArrayList) - Method in class uchicago.src.sim.analysis.Histogram
  Histograms the specified DoubleArrayList and updates the graph.
step() - Method in class uchicago.src.sim.analysis.OpenHistogram
  Records any new data and updates the displayed graph.
step() - Method in class uchicago.src.sim.analysis.plot.OpenGraph
  Records and updates the graph display.
step() - Method in interface uchicago.src.sim.engine.AutoStepable
  normally the method that performs the actual actions of a step
step() - Method in class uchicago.src.sim.engine.DefaultGroup
step() - Method in interface uchicago.src.sim.engine.Group
step() - Method in class uchicago.src.sim.engine.SimpleModel
step() - Method in interface uchicago.src.sim.engine.Stepable
  Executes the agent's behavoir for the current time step.
Stepable - Interface in uchicago.src.sim.engine
  Agents that are "autostepped" in `SimpleModel` must implement this interface.
Stepper - Interface in uchicago.src.codegen
stepSim() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Steps the simulation through one iteration of execution.
stepSim() - Method in class uchicago.src.sim.engine.Controller
stmt() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
stop() - Method in class uchicago.src.repastdemos.enn.EnnBatchModel
stop() - Method in class uchicago.src.repastdemos.heatBugs.HBNoGui
stop() - Method in class uchicago.src.sim.engine.SimModelImpl
  Stops the simulation.
stop() - Method in class uchicago.src.sim.gui.BufferDataSource
STOP_EVENT - Static variable in class uchicago.src.sim.engine.SimEvent
stopCellEditing() - Method in class uchicago.src.sim.engine.gui.components.RadioBarPanel
stopped - Variable in class uchicago.src.sim.engine.BatchController
stopRun() - Method in class uchicago.src.sim.engine.BatchController
  Stops an individual run of the simulation, increments the parameters appropriately, and if necessary starts another run.
stopRun() - Method in class uchicago.src.sim.engine.RemoteBatchController
  Stops an individual run of the simulation, increments the parameters appropriately, and if necessary starts another run.
stopSim() - Method in class uchicago.src.sim.engine.BaseController
  Stops the simulation.
stopSim() - Method in class uchicago.src.sim.engine.Controller
stopSim() - Method in interface uchicago.src.sim.engine.IController
  Stops a simulation run.
stopSimulation() - Method in class uchicago.src.sim.engine.AbstractGUIController
  Stops the simulation.
Strategy - Interface in uchicago.src.sim.games
STRATEGY_UPGRADE - Static variable in class uchicago.src.repastdemos.enn.EnnAgent
strength - Variable in class uchicago.src.sim.network.DefaultEdge
STRING - Static variable in class uchicago.src.guiUtils.Token
String() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
STRING - Static variable in class uchicago.src.sim.util.Disassembler
STRING_SET - Static variable in class uchicago.src.sim.parameter.ParameterLexer
STRING_SET_LIST - Static variable in class uchicago.src.sim.parameter.ParameterLexer
StringArgInvoker - Class in uchicago.src.reflector
StringArgInvoker(Object, Method, String) - Constructor for class uchicago.src.reflector.StringArgInvoker
stringPropertyChanged(PropertyEvent) - Method in interface uchicago.src.sim.engine.PropertyListener
  Invoked when a String property has been changed.
stringPropertyChanged(PropertyEvent) - Method in class uchicago.src.sim.engine.PropertyListenerAdapter
  Invoked when a String property has been changed.
StringRPLConstant - Class in uchicago.src.sim.parameter.rpl
  Defines a constant parameter whose value is a String.
StringRPLConstant(String, String) - Constructor for class uchicago.src.sim.parameter.rpl.StringRPLConstant
  Creates a StringRPLConstant with specified name and value.
stroke - Variable in class uchicago.src.sim.gui.DrawableItem
studentT - Static variable in class uchicago.src.sim.util.Random
subBlock() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
subList(int, int) - Method in class uchicago.src.sim.engine.DefaultGroup
subList(int, int) - Method in class uchicago.src.sim.util.ConservationCollection
subParams - Variable in class uchicago.src.sim.parameter.Parameter
subRuns - Variable in class uchicago.src.sim.parameter.Parameter
SubSchedule - Class in uchicago.src.sim.engine
  Deprecated.
SubSchedule(long) - Constructor for class uchicago.src.sim.engine.SubSchedule
  Deprecated. Constructs a SubSchedule with a default interval of 1, and with the specified number of times to execute its scheduled actions per tick of the parent Schedule
SubSchedule(double, long) - Constructor for class uchicago.src.sim.engine.SubSchedule
  Deprecated. Constructs a SubSchedule with the specifed interval, and with the specified number of times to execute its scheduled actions per tick of the parent Schedule
SugarAgent - Class in uchicago.src.repastdemos.sugarscape
  The agent for the sugar scape simulation.
SugarAgent(SugarSpace, SugarModel) - Constructor for class uchicago.src.repastdemos.sugarscape.SugarAgent
SugarModel - Class in uchicago.src.repastdemos.sugarscape
  An partial implementation of the Sugar Scape simulation from _Growing Artificial Societies_ by Epstein, Joshua M and Axtell, Robert.
SugarModel() - Constructor for class uchicago.src.repastdemos.sugarscape.SugarModel
SugarSpace - Class in uchicago.src.repastdemos.sugarscape
  The space in which the SugarAgents act.
SugarSpace(String) - Constructor for class uchicago.src.repastdemos.sugarscape.SugarSpace
suite() - Method in class uchicago.src.sim.parameter.rpl.RPLParser
sum - Variable in class uchicago.src.sim.network.AbstractProbabilityRule
surface - Variable in class uchicago.src.sim.gui.Painter
SwitchTo(int) - Method in class uchicago.src.sim.parameter.rpl.RPLParserTokenManager

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